Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RHEBP3-201ENST00000411920 351 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 HSPE1P12-201ENST00000412576 301 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AL592148.1-201ENST00000413568 445 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RPL26P27-201ENST00000414397 437 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AL158071.1-201ENST00000430315 461 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RPS3AP52-201ENST00000435639 297 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RPL37P4-201ENST00000448908 268 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RPL12P25-201ENST00000455592 494 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC104472.2-201ENST00000469035 601 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RNU6-559P-201ENST00000516151 98 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC026371.1-201ENST00000551867 419 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AMZ2P1-203ENST00000565833 850 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RNU6-85P-201ENST00000605989 107 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AL355365.1-201ENST00000616480 294 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 MIR6875-201ENST00000617506 72 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 MIR6076-201ENST00000617521 113 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC140479.6-201ENST00000633535 357 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AC106871.1-201ENST00000568324 3102 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 RNU1-14P-201ENST00000362759 152 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 RNU6-166P-201ENST00000384371 107 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 MIR200C-201ENST00000384980 68 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 MIR10A-201ENST00000385043 110 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 MIR888-201ENST00000401186 77 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 UBE2V1P4-201ENST00000425374 344 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 RPL23AP83-201ENST00000434984 473 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 SNRPEP4-201ENST00000435815 279 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 SNORA71B-202ENST00000439232 272 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AL162151.2-201ENST00000448875 158 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AC092798.1-201ENST00000458542 409 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 Y_RNA.632-201ENST00000459189 102 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AC130509.1-201ENST00000464158 433 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AC084198.1-201ENST00000477747 402 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 RPL32P34-201ENST00000486380 400 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 RPS27P27-201ENST00000498779 255 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 RN7SKP24-201ENST00000515888 284 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 IMMP1LP2-201ENST00000552954 492 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 TVP23BP1-201ENST00000557500 617 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 OR1M4P-201ENST00000589199 287 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AC016727.1-205ENST00000605437 569 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AL050343.2-201ENST00000607338 280 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 FAM27D1-201ENST00000612308 341 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AL442067.2-201ENST00000614033 363 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 MIR8059-201ENST00000620427 81 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AL160413.1-201ENST00000622780 310 ntBASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCM2LQ9NUG4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AC138393.1-203ENST00000327086 343 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 SNORA71.3-201ENST00000362582 128 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 RNU6-593P-201ENST00000364716 112 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 RNU6-384P-201ENST00000364900 104 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 RNA5SP36-201ENST00000410197 133 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AL590664.1-201ENST00000448065 339 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AC096745.1-201ENST00000509945 370 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AC006445.2-201ENST00000510061 472 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 TRAV8-5-201ENST00000537369 341 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.8□□□□□ -1.8
CCM2LQ9NUG4 MIR4782-201ENST00000577987 79 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms