Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC011825.1-201ENST00000484967 388 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC080014.1-201ENST00000496877 1201 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC118465.1-201ENST00000513820 1271 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RNU6-914P-201ENST00000516749 109 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 SNORD19.2-201ENST00000516978 73 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RNU6-1315P-201ENST00000517187 99 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 RN7SKP40-201ENST00000517211 242 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC006199.1-201ENST00000548728 219 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC021739.1-201ENST00000559631 174 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AL451007.1-201ENST00000595491 289 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AC131902.3-201ENST00000611767 581 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 AL603839.4-201ENST00000624658 1005 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 MIR7515-201ENST00000637837 67 ntBASIC2.03□□□□□ -2.08
CCL28Q9NRJ3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.03□□□□□ -2.09
CCL28Q9NRJ3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC073346.2-201ENST00000624724 2058 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 SNORA41-201ENST00000384675 132 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 MIR23B-201ENST00000384832 97 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RPL21P75-201ENST00000396599 483 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RPS3AP36-201ENST00000398190 775 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RPL21P28-201ENST00000401418 483 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AL592114.1-201ENST00000403842 483 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AL139095.1-201ENST00000404326 391 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RPS3AP3-201ENST00000411933 242 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AL109913.1-201ENST00000421173 514 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 CETN4P-201ENST00000432407 469 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC105272.1-201ENST00000438604 198 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AL513328.1-201ENST00000446460 224 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RPL21P39-201ENST00000463605 483 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RPL21P93-201ENST00000480465 489 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC093591.1-201ENST00000491435 481 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RPL21P16-201ENST00000495531 483 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC109927.2-201ENST00000506416 303 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC022447.1-201ENST00000515358 464 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RNU2-46P-201ENST00000517038 113 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC026407.1-201ENST00000518369 204 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC009902.1-201ENST00000519351 183 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC060788.1-201ENST00000521318 469 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC022616.3-201ENST00000523940 148 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 COX6CP5-201ENST00000527162 228 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 OR5B19P-201ENST00000531766 928 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 HSPE1P20-201ENST00000538133 289 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC007151.1-201ENST00000572774 483 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AL391813.1-201ENST00000603098 260 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC135507.1-201ENST00000607214 561 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AL392048.1-201ENST00000613946 534 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC008250.2-201ENST00000615261 205 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 AC019226.2-201ENST00000625973 424 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 CU459211.1-201ENST00000635667 749 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 U6.99-201ENST00000637524 83 ntBASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL28Q9NRJ3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 OR5J1P-201ENST00000313544 939 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 FGF7P2-201ENST00000332473 296 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 RNU6-859P-201ENST00000362728 107 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 U8.3-201ENST00000363321 132 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 RNU4-91P-201ENST00000364778 135 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 MIR558-201ENST00000384920 94 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 U3.26-201ENST00000391236 204 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 RNU2-52P-201ENST00000410680 190 ntBASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.01□□□□□ -2.09
CCL28Q9NRJ3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms