Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 U8.3-201ENST00000363321 132 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 RNU5F-7P-201ENST00000363696 115 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 RNU4-91P-201ENST00000364778 135 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 RNA5SP126-201ENST00000365092 109 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 SNORA48.3-201ENST00000391081 134 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 FCF1P10-201ENST00000407590 479 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 RNU2-33P-201ENST00000410344 192 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 Z98742.3-201ENST00000418637 326 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 ZNF90P2-204ENST00000419323 1075 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AL022238.1-201ENST00000442557 355 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 MTND1P12-201ENST00000455231 147 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 SNRPGP9-201ENST00000456025 225 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 RNU6-390P-201ENST00000516259 103 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 RNU6-928P-201ENST00000516876 104 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AP006587.4-201ENST00000526053 529 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AL356057.1-201ENST00000533798 831 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AC078814.3-201ENST00000553036 491 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 HMGB1P14-201ENST00000557424 591 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 GLUD1P4-201ENST00000590914 418 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 MIR6873-201ENST00000622788 63 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AL160394.1-201ENST00000624765 724 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 OR5H6-203ENST00000642105 978 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AC091564.4-201ENST00000533934 2194 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 AC010680.1-201ENST00000590024 3590 ntBASIC2.61□□□□□ -1.99
RNF41Q9H4P4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 RNU6-217P-201ENST00000384164 104 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 RNY3P10-201ENST00000384764 102 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 RNU2-36P-201ENST00000410361 191 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 RNU6-248P-201ENST00000410720 107 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 RN7SKP192-201ENST00000411291 327 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 ELOCP17-201ENST00000414751 326 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AL590383.1-201ENST00000428602 75 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 Z82210.1-201ENST00000440037 231 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 PIGFP3-201ENST00000441918 722 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 SNORD42A-201ENST00000459584 64 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AC087588.1-201ENST00000462203 316 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 MTND1P3-201ENST00000484956 952 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AC010587.1-201ENST00000505809 469 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 RNA5SP337-201ENST00000517007 109 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AL590229.1-201ENST00000603497 542 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 DPPA3P3-201ENST00000603842 430 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AC136601.2-201ENST00000604356 474 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AC073114.1-201ENST00000612027 490 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 AC006338.1-201ENST00000618453 749 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 Z69908.1-201ENST00000622603 247 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 TPTE2P4-201ENST00000258589 1605 ntBASIC2.6□□□□□ -1.99
RNF41Q9H4P4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF41Q9H4P4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF41Q9H4P4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.59□□□□□ -1.99
RNF41Q9H4P4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF41Q9H4P4 FGF7P2-201ENST00000332473 296 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 RNU5E-1-201ENST00000362477 120 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 SNORD56.5-201ENST00000364281 72 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 RNU5E-6P-201ENST00000365574 115 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 RNU6-741P-201ENST00000383889 107 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 SNORD116-1-201ENST00000384335 95 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 RNU6-1035P-201ENST00000384477 107 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF41Q9H4P4 MIR1302-8-201ENST00000408342 128 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 RNU2-62P-201ENST00000410868 191 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 RPS3AP3-201ENST00000411933 242 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 HMGN1P14-201ENST00000412459 517 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF41Q9H4P4 AL512844.2-201ENST00000433990 593 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 AL714022.1-201ENST00000439897 151 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF41Q9H4P4 Z83846.1-201ENST00000446798 265 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 AL353705.4-201ENST00000449661 238 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 SNRPGP6-201ENST00000451124 220 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF41Q9H4P4 SSXP1-201ENST00000453640 473 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 RBM43P1-201ENST00000476891 1081 ntBASIC2.59□□□□□ -1.99
RNF41Q9H4P4 MTND5P13-201ENST00000513046 1079 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms