Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CCNG1P1-201ENST00000406783 885 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 AC009310.1-201ENST00000414414 451 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 UBE2FP1-201ENST00000416536 447 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 AL161788.1-201ENST00000441805 169 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 MTND1P9-201ENST00000453775 944 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 AC021382.1-201ENST00000483523 359 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VCX3BQ9H321 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 OR6C7P-201ENST00000547875 934 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 MIR3912-201ENST00000577566 105 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 AL139344.1-201ENST00000605228 195 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 AC010133.1-201ENST00000615809 842 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.42□□□□□ -2.18
VCX3BQ9H321 AC009268.2-201ENST00000621925 457 ntBASIC1.42□□□□□ -2.18
VCX3BQ9H321 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
VCX3BQ9H321 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VCX3BQ9H321 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VCX3BQ9H321 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 RNU6-1207P-201ENST00000384343 107 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 MIR128-1-201ENST00000384921 82 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.41□□□□□ -2.18
VCX3BQ9H321 MRPS36P1-201ENST00000421291 307 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.41□□□□□ -2.18
VCX3BQ9H321 USP9YP10-201ENST00000454868 628 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 AC117503.1-201ENST00000472241 394 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 AC114781.4-201ENST00000513707 639 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.41□□□□□ -2.18
VCX3BQ9H321 AL356432.3-201ENST00000568952 465 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.41□□□□□ -2.18
VCX3BQ9H321 LARP7P3-201ENST00000579888 337 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.41□□□□□ -2.18
VCX3BQ9H321 AC239868.4-201ENST00000608318 671 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.41□□□□□ -2.18
VCX3BQ9H321 AC006386.2-201ENST00000624491 75 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 AC012005.1-201ENST00000624575 75 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.41□□□□□ -2.18
VCX3BQ9H321 U2.21-201ENST00000637295 81 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VCX3BQ9H321 AP000776.1-201ENST00000530032 1663 ntBASIC1.41□□□□□ -2.18
VCX3BQ9H321 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VCX3BQ9H321 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 AL161781.1-201ENST00000354277 403 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 RNU6-114P-201ENST00000384704 105 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 RNA5SP465-201ENST00000391195 109 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AL590084.2-201ENST00000401481 382 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 USP9YP19-201ENST00000412165 485 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 USP9YP13-201ENST00000417797 480 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 USP9YP21-201ENST00000420603 432 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 SKA2P1-201ENST00000425592 390 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC010153.1-201ENST00000432862 727 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 SNRPEP9-201ENST00000436794 238 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 COX7BP2-201ENST00000437976 242 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AL121601.2-201ENST00000438019 707 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 RPL7P54-201ENST00000438336 674 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AL137159.1-201ENST00000452808 512 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC004924.1-201ENST00000480160 781 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AL160314.1-201ENST00000490836 438 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC092436.1-201ENST00000506450 503 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 RNY4P37-201ENST00000516225 96 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC104072.1-201ENST00000568817 668 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC012468.1-201ENST00000604888 430 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 MIR502-201ENST00000606349 86 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC004777.1-201ENST00000624317 287 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AL356094.1-201ENST00000624663 1212 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 AC019226.1-201ENST00000625666 515 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.4□□□□□ -2.19
VCX3BQ9H321 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
VCX3BQ9H321 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VCX3BQ9H321 AL079343.1-201ENST00000572358 1771 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 Y_RNA.67-201ENST00000362870 100 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 RNU6-778P-201ENST00000363269 103 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 SNORA5B-201ENST00000363786 132 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 snoZ40.1-201ENST00000364540 72 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 RNU6-754P-201ENST00000391166 107 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 TXNP7-201ENST00000406296 293 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.39□□□□□ -2.19
VCX3BQ9H321 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.39□□□□□ -2.19
VCX3BQ9H321 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms