Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC093012.1-202ENST00000549403 582 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 ARL2BPP2-201ENST00000550907 489 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 HMGB1P14-201ENST00000557424 591 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 HMGB1P6-201ENST00000569046 646 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 KC877982.1-201ENST00000602313 470 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC080078.2-201ENST00000603766 501 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC091805.2-201ENST00000603848 235 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AL136363.2-201ENST00000604173 851 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC112191.3-201ENST00000604371 277 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC093732.2-201ENST00000607950 274 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AC093536.2-201ENST00000565257 1406 ntBASIC2.33□□□□□ -2.04
EBF4Q9BQW3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
EBF4Q9BQW3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 FTLP6-201ENST00000355274 422 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 U8.3-201ENST00000363321 132 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RNU4-91P-201ENST00000364778 135 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RNU6-217P-201ENST00000384164 104 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RNU6-198P-201ENST00000384258 104 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 SNORA48.7-201ENST00000391302 135 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RPS4XP7-201ENST00000406274 780 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RPS3AP3-201ENST00000411933 242 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 GAPDHP17-201ENST00000449858 1001 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 KLF3P2-201ENST00000465138 268 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 S100A11P2-201ENST00000467589 312 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RPL23AP45-201ENST00000476406 468 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 MTND1P3-201ENST00000484956 952 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RN7SKP24-201ENST00000515888 284 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RNA5SP471-201ENST00000516971 106 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RN7SKP40-201ENST00000517211 242 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC022878.1-201ENST00000530684 149 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AP002453.2-201ENST00000533503 320 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC016957.1-201ENST00000534895 309 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC245505.1-201ENST00000556398 224 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC010546.1-201ENST00000569391 485 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 MIR4429-201ENST00000580105 73 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 SRGNP1-201ENST00000603392 451 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC136601.2-201ENST00000604356 474 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AF250324.2-201ENST00000608299 610 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC103710.2-201ENST00000609912 942 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC138749.5-201ENST00000611461 208 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC091304.9-201ENST00000612091 226 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC090970.3-201ENST00000612566 866 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC011890.2-201ENST00000613393 294 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC008250.2-201ENST00000615261 205 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC015540.1-201ENST00000615828 501 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 uc_338.12-201ENST00000616344 181 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC116165.2-201ENST00000616705 206 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 AC010149.2-201ENST00000637608 315 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.32□□□□□ -2.04
EBF4Q9BQW3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
EBF4Q9BQW3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
EBF4Q9BQW3 AC010680.1-201ENST00000590024 3590 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
EBF4Q9BQW3 RNU4-1-201ENST00000363925 141 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 RNA5SP139-201ENST00000364340 117 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 RN7SKP226-201ENST00000364912 300 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 RNU6-1215P-201ENST00000384441 102 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 AL139039.1-201ENST00000401900 692 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 NDUFS5P1-201ENST00000405668 289 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 RNU2-36P-201ENST00000410361 191 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 Y_RNA.598-201ENST00000410480 95 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 RNU2-52P-201ENST00000410680 190 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.31□□□□□ -2.04
EBF4Q9BQW3 BX295541.1-201ENST00000417774 250 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 BTF3L4P3-201ENST00000418879 476 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 AC093106.2-201ENST00000428212 385 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.31□□□□□ -2.04
EBF4Q9BQW3 MTND1P4-201ENST00000435196 415 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.31□□□□□ -2.04
EBF4Q9BQW3 AC105272.1-201ENST00000438604 198 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms