Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.56□□□□□ -2
SSX3Q99909 MTATP6P7-201ENST00000453315 681 ntBASIC2.56□□□□□ -2
SSX3Q99909 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.56□□□□□ -2
SSX3Q99909 RNU6-956P-201ENST00000458868 103 ntBASIC2.56□□□□□ -2
SSX3Q99909 AC006445.1-201ENST00000491925 405 ntBASIC2.56□□□□□ -2
SSX3Q99909 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.56□□□□□ -2
SSX3Q99909 BTF3P12-201ENST00000519620 469 ntBASIC2.56□□□□□ -2
SSX3Q99909 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.56□□□□□ -2
SSX3Q99909 AP003122.3-201ENST00000526316 255 ntBASIC2.56□□□□□ -2
SSX3Q99909 AC084851.1-201ENST00000529105 249 ntBASIC2.56□□□□□ -2
SSX3Q99909 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.56□□□□□ -2
SSX3Q99909 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.56□□□□□ -2
SSX3Q99909 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.56□□□□□ -2
SSX3Q99909 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSX3Q99909 AC010620.1-201ENST00000601088 1102 ntBASIC2.56□□□□□ -2
SSX3Q99909 AC064872.1-201ENST00000604823 1072 ntBASIC2.56□□□□□ -2
SSX3Q99909 MIR98-201ENST00000606724 119 ntBASIC2.56□□□□□ -2
SSX3Q99909 uc_338.25-201ENST00000613756 156 ntBASIC2.56□□□□□ -2
SSX3Q99909 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.56□□□□□ -2
SSX3Q99909 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
SSX3Q99909 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSX3Q99909 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.56□□□□□ -2
SSX3Q99909 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SSX3Q99909 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SSX3Q99909 OR5J1P-201ENST00000313544 939 ntBASIC2.55□□□□□ -2
SSX3Q99909 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSX3Q99909 MIR422A-201ENST00000362286 90 ntBASIC2.55□□□□□ -2
SSX3Q99909 Y_RNA.77-201ENST00000362962 107 ntBASIC2.55□□□□□ -2
SSX3Q99909 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.55□□□□□ -2
SSX3Q99909 Y_RNA.534-201ENST00000384599 112 ntBASIC2.55□□□□□ -2
SSX3Q99909 MIR181B1-201ENST00000385240 110 ntBASIC2.55□□□□□ -2
SSX3Q99909 RNA5SP229-201ENST00000410809 99 ntBASIC2.55□□□□□ -2
SSX3Q99909 AC114491.1-201ENST00000416095 246 ntBASIC2.55□□□□□ -2
SSX3Q99909 BX295541.1-201ENST00000417774 250 ntBASIC2.55□□□□□ -2
SSX3Q99909 C1DP2-201ENST00000418167 426 ntBASIC2.55□□□□□ -2
SSX3Q99909 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.55□□□□□ -2
SSX3Q99909 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.55□□□□□ -2
SSX3Q99909 RPL31P35-201ENST00000431058 377 ntBASIC2.55□□□□□ -2
SSX3Q99909 AL591704.1-201ENST00000432574 275 ntBASIC2.55□□□□□ -2
SSX3Q99909 RPL36AP6-201ENST00000435770 321 ntBASIC2.55□□□□□ -2
SSX3Q99909 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.55□□□□□ -2
SSX3Q99909 AC244505.5-201ENST00000443639 207 ntBASIC2.55□□□□□ -2
SSX3Q99909 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.55□□□□□ -2
SSX3Q99909 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.55□□□□□ -2
SSX3Q99909 ELOCP23-201ENST00000452014 332 ntBASIC2.55□□□□□ -2
SSX3Q99909 RPL31P3-201ENST00000458430 332 ntBASIC2.55□□□□□ -2
SSX3Q99909 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.55□□□□□ -2
SSX3Q99909 AC108078.2-201ENST00000510750 236 ntBASIC2.55□□□□□ -2
SSX3Q99909 AC091826.1-201ENST00000514065 313 ntBASIC2.55□□□□□ -2
SSX3Q99909 AC117532.1-201ENST00000514638 323 ntBASIC2.55□□□□□ -2
SSX3Q99909 AC022447.1-201ENST00000515358 464 ntBASIC2.55□□□□□ -2
SSX3Q99909 RNA5SP341-201ENST00000516261 117 ntBASIC2.55□□□□□ -2
SSX3Q99909 SCARNA24.1-201ENST00000516465 137 ntBASIC2.55□□□□□ -2
SSX3Q99909 RNU6-703P-201ENST00000516946 107 ntBASIC2.55□□□□□ -2
SSX3Q99909 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.55□□□□□ -2
SSX3Q99909 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.55□□□□□ -2
SSX3Q99909 AL356057.1-201ENST00000533798 831 ntBASIC2.55□□□□□ -2
SSX3Q99909 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.55□□□□□ -2
SSX3Q99909 AC004486.1-201ENST00000546846 233 ntBASIC2.55□□□□□ -2
SSX3Q99909 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.55□□□□□ -2
SSX3Q99909 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.55□□□□□ -2
SSX3Q99909 MIR4325-201ENST00000583049 90 ntBASIC2.55□□□□□ -2
SSX3Q99909 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.55□□□□□ -2
SSX3Q99909 RPL12P50-201ENST00000603116 116 ntBASIC2.55□□□□□ -2
SSX3Q99909 AL158032.1-201ENST00000605401 106 ntBASIC2.55□□□□□ -2
SSX3Q99909 AC087752.4-201ENST00000605911 462 ntBASIC2.55□□□□□ -2
SSX3Q99909 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.55□□□□□ -2
SSX3Q99909 MIR15A-201ENST00000607334 83 ntBASIC2.55□□□□□ -2
SSX3Q99909 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
SSX3Q99909 AL589743.7-201ENST00000612637 233 ntBASIC2.55□□□□□ -2
SSX3Q99909 HMGB1P24-202ENST00000615653 685 ntBASIC2.55□□□□□ -2
SSX3Q99909 AL359547.2-201ENST00000615810 418 ntBASIC2.55□□□□□ -2
SSX3Q99909 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
SSX3Q99909 AC091903.1-201ENST00000624322 454 ntBASIC2.55□□□□□ -2
SSX3Q99909 U6.99-201ENST00000637524 83 ntBASIC2.55□□□□□ -2
SSX3Q99909 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.55□□□□□ -2
SSX3Q99909 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
SSX3Q99909 ADAM3A-203ENST00000461344 2157 ntBASIC2.54□□□□□ -2
SSX3Q99909 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.54□□□□□ -2
SSX3Q99909 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.54□□□□□ -2
SSX3Q99909 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSX3Q99909 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSX3Q99909 Y_RNA.22-201ENST00000362492 102 ntBASIC2.54□□□□□ -2
SSX3Q99909 SNORA4.3-201ENST00000365564 137 ntBASIC2.54□□□□□ -2
SSX3Q99909 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
SSX3Q99909 SNORD116-2-201ENST00000384274 95 ntBASIC2.54□□□□□ -2
SSX3Q99909 SNORD116-6-201ENST00000384711 96 ntBASIC2.54□□□□□ -2
SSX3Q99909 SNORD15B-201ENST00000384714 146 ntBASIC2.54□□□□□ -2
SSX3Q99909 RPL17P50-201ENST00000396131 546 ntBASIC2.54□□□□□ -2
SSX3Q99909 AL138885.1-201ENST00000405921 675 ntBASIC2.54□□□□□ -2
SSX3Q99909 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.54□□□□□ -2
SSX3Q99909 AL353706.1-201ENST00000436728 494 ntBASIC2.54□□□□□ -2
SSX3Q99909 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.54□□□□□ -2
SSX3Q99909 KATNBL1P3-201ENST00000443475 909 ntBASIC2.54□□□□□ -2
SSX3Q99909 USP9YP29-201ENST00000445112 563 ntBASIC2.54□□□□□ -2
SSX3Q99909 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.54□□□□□ -2
SSX3Q99909 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.54□□□□□ -2
SSX3Q99909 AC026801.1-201ENST00000497178 464 ntBASIC2.54□□□□□ -2
SSX3Q99909 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.54□□□□□ -2
SSX3Q99909 AC109927.2-201ENST00000506416 303 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms