Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC107401.1-201ENST00000503426 685 ntBASIC3.46□□□□□ -1.86
SIN3AQ96ST3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.46□□□□□ -1.86
SIN3AQ96ST3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.46□□□□□ -1.86
SIN3AQ96ST3 RNU6-445P-201ENST00000516949 107 ntBASIC3.46□□□□□ -1.86
SIN3AQ96ST3 AC090572.1-201ENST00000519251 160 ntBASIC3.46□□□□□ -1.86
SIN3AQ96ST3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.46□□□□□ -1.86
SIN3AQ96ST3 AC078899.3-201ENST00000599065 212 ntBASIC3.46□□□□□ -1.86
SIN3AQ96ST3 AL160394.1-201ENST00000624765 724 ntBASIC3.46□□□□□ -1.86
SIN3AQ96ST3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.46□□□□□ -1.86
SIN3AQ96ST3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SIN3AQ96ST3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIN3AQ96ST3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.46□□□□□ -1.86
SIN3AQ96ST3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 SNORD56.2-201ENST00000363242 71 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 Y_RNA.296-201ENST00000364930 108 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 TXNP7-201ENST00000406296 293 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 Y_RNA.619-201ENST00000410951 90 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 RNU2-71P-201ENST00000411395 189 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 DPPA2P1-201ENST00000428060 556 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AL451074.3-201ENST00000437709 472 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 MTATP6P30-201ENST00000443540 664 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 MTND1P1-201ENST00000445453 368 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AC234781.5-201ENST00000508429 271 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 SCARNA24.1-201ENST00000516465 137 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AP003072.2-201ENST00000527756 676 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AL512310.1-201ENST00000548639 172 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AC067747.1-201ENST00000608026 250 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 MIR1291-201ENST00000627649 87 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.45□□□□□ -1.86
SIN3AQ96ST3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.45□□□□□ -1.86
SIN3AQ96ST3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 HSPE1P11-201ENST00000339579 310 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 DEFB108F-201ENST00000344638 222 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 Y_RNA.22-201ENST00000362492 102 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 RNU5A-1-201ENST00000362698 116 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 RNU6-1103P-201ENST00000384150 107 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 SNORA26.7-201ENST00000391288 122 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 SNRPGP6-201ENST00000451124 220 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AP000705.1-201ENST00000454567 350 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 RPL21P8-201ENST00000465083 535 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 HMGB1P29-201ENST00000505659 499 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 SNORA70.16-201ENST00000516390 95 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AC011979.2-201ENST00000527568 352 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AP001646.1-201ENST00000527936 915 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AC021269.2-201ENST00000532318 330 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 GLUD1P4-201ENST00000590914 418 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AL359198.2-201ENST00000611836 194 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 CTSLP2-204ENST00000629029 392 ntBASIC3.44□□□□□ -1.86
SIN3AQ96ST3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SIN3AQ96ST3 RNU5E-6P-201ENST00000365574 115 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 U8.9-201ENST00000365667 134 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 SNORA41-201ENST00000384675 132 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SIN3AQ96ST3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SIN3AQ96ST3 AC008850.1-201ENST00000427546 362 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 USP12PX-201ENST00000432383 1057 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 RPL23AP30-201ENST00000432419 501 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 AC093392.2-201ENST00000450682 337 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 AC091179.1-201ENST00000461606 579 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 RPS27AP1-201ENST00000475545 471 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.43□□□□□ -1.86
SIN3AQ96ST3 RNU6-840P-201ENST00000517275 65 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 FAM92A1P1-201ENST00000528023 890 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 AL163153.1-201ENST00000554223 283 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 AP001029.3-201ENST00000588063 596 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.43□□□□□ -1.86
SIN3AQ96ST3 AL391646.1-201ENST00000603860 190 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 AC010133.1-201ENST00000615809 842 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SIN3AQ96ST3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.43□□□□□ -1.86
SIN3AQ96ST3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIN3AQ96ST3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.43□□□□□ -1.86
SIN3AQ96ST3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.43□□□□□ -1.86
SIN3AQ96ST3 AC110774.1-201ENST00000623567 2018 ntBASIC3.43□□□□□ -1.86
SIN3AQ96ST3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 Y_RNA.159-201ENST00000363674 87 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 RNY1P12-201ENST00000364251 105 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 DEFB109C-201ENST00000382575 264 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 DEFB109B-201ENST00000382656 264 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms