Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 AL161798.1-201ENST00000604630 131 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC027449.1-201ENST00000608890 407 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC011939.3-201ENST00000613686 466 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC006927.4-201ENST00000639187 543 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC106754.1-201ENST00000562632 1513 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC080128.1-201ENST00000474389 1917 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 RNA5SP425-201ENST00000410336 112 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 MTCO2P8-201ENST00000412213 658 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 SKA2P1-201ENST00000425592 390 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 UBE2FP3-201ENST00000436366 524 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 AL009048.1-201ENST00000450437 298 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC055855.1-201ENST00000489563 579 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 SCARNA3-201ENST00000517097 143 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 RNA5SP165-201ENST00000517142 115 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 DEFB108A-201ENST00000530110 222 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 RPS3AP4-201ENST00000555161 764 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 AL049838.1-201ENST00000563647 981 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC024619.4-201ENST00000580924 316 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC112187.2-201ENST00000604345 283 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC106052.1-201ENST00000608029 497 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC112204.3-201ENST00000623822 332 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 AC093591.3-201ENST00000634516 308 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 ZNF658B-202ENST00000615961 3375 ntBASIC2.02□□□□□ -2.09
COL21A1Q96P44 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 HSPE1P11-201ENST00000339579 310 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 RNU6-931P-201ENST00000363850 107 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 RNU6-906P-201ENST00000384700 70 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 SNORA3.2-201ENST00000408221 125 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 SNORA11.4-201ENST00000408823 129 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 RNU6-920P-201ENST00000410926 92 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 Z98742.3-201ENST00000418637 326 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 BTF3L4P3-201ENST00000418879 476 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC005005.2-201ENST00000420779 380 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC104651.1-201ENST00000427559 735 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 HMGN2P10-201ENST00000448085 265 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 CECR9-201ENST00000453421 199 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 RNU7-26P-201ENST00000458980 63 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC023141.11-201ENST00000508864 202 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 MTCYBP43-201ENST00000513621 740 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 RNU6-703P-201ENST00000516946 107 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 AP004247.1-201ENST00000531556 1289 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC135628.1-201ENST00000568867 534 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 MIR1273D-201ENST00000577266 86 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC021171.1-201ENST00000603137 706 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 AL158042.1-201ENST00000605338 460 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 AL050303.3-201ENST00000613704 284 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC010678.1-201ENST00000614118 713 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 AC092125.1-201ENST00000562568 1995 ntBASIC2.01□□□□□ -2.09
COL21A1Q96P44 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL21A1Q96P44 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.01□□□□□ -2.09
COL21A1Q96P44 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL21A1Q96P44 ZNF29P-201ENST00000225587 168 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL21A1Q96P44 SNORA72.3-201ENST00000365074 132 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL21A1Q96P44 RNU6-769P-201ENST00000384407 104 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 MIR764-201ENST00000390811 85 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 PIGPP2-201ENST00000411569 458 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 USP9YP6-201ENST00000413550 854 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2□□□□□ -2.09
COL21A1Q96P44 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2□□□□□ -2.09
COL21A1Q96P44 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL21A1Q96P44 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2□□□□□ -2.09
COL21A1Q96P44 AL591806.2-201ENST00000433122 173 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms