Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 HMGN2P7-201ENST00000456186 273 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 KC877373.1-201ENST00000479066 408 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 SUMO2P6-201ENST00000505273 288 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 RN7SKP24-201ENST00000515888 284 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 RNU6-579P-201ENST00000516879 102 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 SNORA25.17-201ENST00000517184 124 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 IGKV2-23-201ENST00000518729 323 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 TRMT10BP1-201ENST00000519377 943 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 TRAV28-201ENST00000557548 323 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AL031601.2-202ENST00000622650 282 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AL732372.2-225ENST00000642124 456 ntBASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTHRC1Q96CG8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CTHRC1Q96CG8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CTHRC1Q96CG8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.4□□□□□ -1.86
CTHRC1Q96CG8 RNU6-562P-201ENST00000362731 107 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 RNA5SP51-201ENST00000364750 119 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 SNORA62.3-201ENST00000365110 153 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 Y_RNA.339-201ENST00000365325 102 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 RNU6-214P-201ENST00000384130 107 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 MIR493-201ENST00000385254 89 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 RNU6-1197P-201ENST00000391183 107 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AL356057.2-201ENST00000403318 432 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 MIR548F5-201ENST00000408421 86 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AL672296.1-201ENST00000427780 2158 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 HMGB1P12-201ENST00000438594 598 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 RPL32P28-201ENST00000443577 397 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AL360271.2-201ENST00000447710 161 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 FABP5P15-201ENST00000453566 214 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 CEACAMP4-201ENST00000457676 421 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 RPL9P32-201ENST00000464118 620 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 RPS27P27-201ENST00000498779 255 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 MTND3P25-201ENST00000509243 135 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 RNU6-559P-201ENST00000516151 98 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 RN7SKP289-201ENST00000517244 295 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 HPRT1P3-201ENST00000539521 576 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 MIR4429-201ENST00000580105 73 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 POLR3GP2-201ENST00000588366 668 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AC073539.2-201ENST00000597113 165 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 APOOP1-201ENST00000604695 592 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AC016727.1-205ENST00000605437 569 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AC012531.5-201ENST00000611375 151 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AL138726.1-201ENST00000614873 333 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 AC126177.8-201ENST00000618339 1015 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 U7.8-201ENST00000619968 63 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CTHRC1Q96CG8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AP001486.2-201ENST00000561652 5113 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RNU6-266P-201ENST00000364225 107 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RNA5SP42-201ENST00000364278 115 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RNU6-283P-201ENST00000364788 107 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 SNORA73.2-201ENST00000364946 201 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AL359837.1-201ENST00000381357 287 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RNU6-1297P-201ENST00000384415 104 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AL360182.1-201ENST00000397433 468 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AL391417.1-201ENST00000404100 426 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RNU6-1025P-201ENST00000410629 104 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 ATP5A1P2-201ENST00000412323 255 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RPL23AP62-201ENST00000463396 453 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 MTND4P17-201ENST00000470444 350 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RPS4XP13-201ENST00000483219 789 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AC008526.1-201ENST00000509149 338 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RNU1-95P-201ENST00000516357 160 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 RNU6-1332P-201ENST00000516666 104 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 269.3 ms