Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 ELL2P3-201ENST00000457883 1602 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 Y_RNA.654-201ENST00000497848 106 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 RNA5SP437-201ENST00000517249 129 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC025857.1-201ENST00000525252 377 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TTC28Q96AY4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC012254.4-201ENST00000588843 273 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC103810.9-201ENST00000606688 112 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 Y_RNA.804-201ENST00000615262 101 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 Y_RNA.204-201ENST00000364112 102 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 Y_RNA.375-201ENST00000365625 101 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 RNU6-39P-201ENST00000384344 107 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 DSTNP4-201ENST00000399472 474 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 SFR1P1-201ENST00000403720 688 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC010099.1-201ENST00000455434 375 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 CBX3P3-201ENST00000508108 532 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 RNU6-1095P-201ENST00000516148 108 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 SNORA70.16-201ENST00000516390 95 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 OR5AK1P-201ENST00000524837 922 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 C1DP5-201ENST00000525775 383 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 MIR5194-201ENST00000582634 120 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 HMGB1P51-201ENST00000605166 638 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC079395.3-201ENST00000615161 484 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 MIR421-201ENST00000365696 85 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 RNU6-1226P-201ENST00000384317 107 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 MIR524-201ENST00000385242 87 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AL022718.1-201ENST00000412004 84 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 BEND7P1-201ENST00000422058 457 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 PMCHL2-203ENST00000457791 237 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC026801.1-201ENST00000497178 464 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 OR5BM1P-201ENST00000512021 366 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC091965.2-201ENST00000512324 613 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 RNU5F-8P-201ENST00000515941 111 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 SNORA48.10-201ENST00000516965 160 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC008676.3-201ENST00000521237 435 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TTC28Q96AY4 Y_RNA.757-201ENST00000578934 114 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC025588.3-201ENST00000604182 274 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC010738.1-201ENST00000604970 987 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AC020658.4-201ENST00000613987 684 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 AL118508.4-201ENST00000624142 1176 ntBASIC0.78□□□□□ -2.28
TTC28Q96AY4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.78□□□□□ -2.29
TTC28Q96AY4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 Y_RNA.293-201ENST00000364908 93 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 RPL7P27-201ENST00000403775 720 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
TTC28Q96AY4 SNRPGP6-201ENST00000451124 220 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.77□□□□□ -2.29
TTC28Q96AY4 AL359385.1-201ENST00000456509 365 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 RNU6-420P-201ENST00000458780 107 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC107626.1-201ENST00000471084 183 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 CENPUP1-201ENST00000526649 1202 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC027104.1-201ENST00000563702 681 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC011374.2-201ENST00000607135 526 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AP001486.3-201ENST00000615334 372 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 Y_RNA.778-201ENST00000620203 90 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC097655.1-201ENST00000635075 318 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 RNU6-989P-201ENST00000362756 107 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 Y_RNA.55-201ENST00000362797 102 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 RNY4P7-201ENST00000364600 96 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 Y_RNA.468-201ENST00000384298 102 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 SNORD51-201ENST00000384320 80 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 U3.29-201ENST00000391296 212 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC079780.1-201ENST00000428259 207 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC078857.1-201ENST00000469870 667 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC104108.1-201ENST00000509930 412 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 RN7SKP179-201ENST00000516126 217 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 Y_RNA.684-201ENST00000516510 99 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC083923.1-201ENST00000523708 376 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 HAUS1P3-201ENST00000523909 662 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.77□□□□□ -2.29
TTC28Q96AY4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC010620.1-201ENST00000601088 1102 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC021851.1-201ENST00000608537 1082 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 AC006213.5-201ENST00000619673 288 ntBASIC0.77□□□□□ -2.29
TTC28Q96AY4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TTC28Q96AY4 Y_RNA.35-201ENST00000362601 101 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
TTC28Q96AY4 ZNF90P2-204ENST00000419323 1075 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 SEPT2P1-201ENST00000419651 180 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 TRBVB-201ENST00000477100 408 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 AC105252.1-201ENST00000503089 286 ntBASIC0.76□□□□□ -2.29
TTC28Q96AY4 MRPS36P2-201ENST00000512569 299 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms