Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPL21P66-201ENST00000426566 466 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AL592045.1-201ENST00000429867 352 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 Y_RNA.635-201ENST00000459041 101 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 RN7SL132P-201ENST00000478131 296 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AC021205.2-201ENST00000480069 347 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AC009901.1-201ENST00000506703 541 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AC005921.1-201ENST00000510589 286 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 TBCAP3-201ENST00000512475 312 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 SNORA70.16-201ENST00000516390 95 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 RNU6-1069P-201ENST00000516612 133 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 ANP32BP3-201ENST00000559213 706 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 ZNF285B-201ENST00000561698 1767 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AC098826.3-201ENST00000603823 466 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AL133255.1-201ENST00000606374 441 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AC032011.1-201ENST00000611703 1549 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 FAM157A-202ENST00000615155 405 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RNA5SP197-201ENST00000363357 119 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RNU6-371P-201ENST00000364283 108 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RNA5SP189-201ENST00000364920 115 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RNU1-64P-201ENST00000365443 163 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RPS4XP7-201ENST00000406274 780 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RN7SKP177-201ENST00000410567 355 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 Z99755.1-201ENST00000414048 380 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 VN1R36P-201ENST00000414936 291 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AL354751.2-201ENST00000415471 210 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 BTF3L4P3-201ENST00000418879 476 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AL139396.1-201ENST00000421137 167 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RPL23AP82-202ENST00000427528 469 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC018644.1-201ENST00000429934 551 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC107399.1-201ENST00000451226 265 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 U3.44-201ENST00000458938 192 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 SNORD19B-201ENST00000459623 84 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RPS15AP34-201ENST00000487776 387 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 SUMO2P6-201ENST00000505273 288 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RPL39P5-202ENST00000512505 151 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 RNA5SP454-201ENST00000517231 127 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC107934.2-201ENST00000518653 310 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 CYCSP27-201ENST00000527643 293 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC004024.1-201ENST00000549244 247 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 MIR5692A1-201ENST00000580523 69 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 MIR548AC-201ENST00000585049 88 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 MIR5692C1-201ENST00000585309 91 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC012119.1-201ENST00000603184 222 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AL161798.1-201ENST00000604630 131 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 APOOP1-201ENST00000604695 592 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC245389.1-201ENST00000605141 529 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC090132.2-201ENST00000615881 347 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 AL512643.1-201ENST00000635735 524 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 Z99571.1-201ENST00000636677 394 ntBASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4AQ8WYN0 USP8P1-201ENST00000494673 3183 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 Y_RNA.135-201ENST00000363439 95 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 RNU6-512P-201ENST00000364438 103 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 MIR450B-201ENST00000401182 78 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 MIR1302-11-201ENST00000408051 138 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 MIR1302-9-201ENST00000408365 138 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 MIR1302-10-201ENST00000408734 138 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 RN7SKP158-201ENST00000410453 326 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AC074085.1-201ENST00000413598 418 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AC063979.1-201ENST00000415539 377 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AL356968.1-201ENST00000416622 474 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 RPL23AP69-201ENST00000431134 458 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AL445584.1-201ENST00000431451 330 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 RPS24P13-201ENST00000442520 397 ntBASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4AQ8WYN0 RPL7P5-201ENST00000471472 736 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms