Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 MIR4703-201ENST00000577728 79 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AC107294.3-201ENST00000609211 526 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AC096577.2-201ENST00000611455 153 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AL603758.1-201ENST00000618654 241 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AL133216.2-202ENST00000634512 349 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 MIR4496-201ENST00000635896 61 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.138-201ENST00000363462 102 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 SNORA71.1-201ENST00000364523 117 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 RNU4-66P-201ENST00000365199 138 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 SNORD115-7-201ENST00000365306 82 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.387-201ENST00000383918 102 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AL136372.1-201ENST00000403060 228 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AL451054.2-201ENST00000420896 202 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AF228730.4-201ENST00000421457 183 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 HSPE1P1-201ENST00000421494 318 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 MTCO2P12-201ENST00000427426 682 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AL590639.1-201ENST00000456484 337 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AC100870.1-201ENST00000522035 505 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AP003072.1-201ENST00000531740 145 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 CR383656.7-201ENST00000548164 174 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AL121603.1-201ENST00000553815 142 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AC012443.1-201ENST00000605605 231 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AL022345.1-201ENST00000607292 135 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AL365204.3-201ENST00000612448 685 ntBASIC3.18□□□□□ -1.9
LMO3Q8TAP4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LMO3Q8TAP4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 RNU6-61P-201ENST00000365528 109 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.373-201ENST00000365600 103 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 RNU6-641P-201ENST00000384006 107 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 RNU6-637P-201ENST00000384050 107 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 SNORA24.1-201ENST00000384401 135 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AL359634.1-202ENST00000404721 284 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AC005517.2-201ENST00000424673 553 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 RPL7L1P10-201ENST00000427790 463 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 NDUFA5P4-201ENST00000436704 385 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 MTND4P19-201ENST00000446659 478 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AL162389.1-201ENST00000449233 177 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 IFNWP4-201ENST00000453148 294 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 RPS15AP36-201ENST00000492022 382 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 KLHL2P1-201ENST00000508691 521 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 RPL7P20-201ENST00000520308 745 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AL118558.2-201ENST00000556294 238 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AC005668.1-201ENST00000571142 476 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 AC103710.3-201ENST00000608157 948 ntBASIC3.17□□□□□ -1.9
LMO3Q8TAP4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
LMO3Q8TAP4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AC244517.1-201ENST00000606030 2086 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO3Q8TAP4 SNORD46.1-201ENST00000364139 104 ntBASIC3.16□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms