Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC011939.3-201ENST00000613686 466 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 AL133173.2-201ENST00000614270 90 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 MIR3199-2-201ENST00000636243 86 ntBASIC2.72□□□□□ -1.97
CASC4Q6P4E1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.72□□□□□ -1.97
CASC4Q6P4E1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 RNU4-91P-201ENST00000364778 135 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 MIR592-201ENST00000384959 97 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 MIR301A-201ENST00000385261 86 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 RNA5SP210-201ENST00000391034 120 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC096649.2-201ENST00000416186 393 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC009518.2-201ENST00000418056 731 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AL109913.1-201ENST00000421173 514 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 MED13P1-201ENST00000428342 171 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AL591704.1-201ENST00000432574 275 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 GAPDHP17-201ENST00000449858 1001 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 FABP5P13-201ENST00000452144 328 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 snoU109.1-201ENST00000459339 135 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 SNORD42A-201ENST00000459584 64 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC128713.1-201ENST00000471495 306 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 TRBV1-201ENST00000476502 284 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 RPL23AP70-201ENST00000483361 460 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 RNU6-1315P-201ENST00000517187 99 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC006199.1-201ENST00000548728 219 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC090616.3-201ENST00000582184 217 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AL451007.1-201ENST00000595491 289 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC005261.5-201ENST00000596280 355 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC025811.1-201ENST00000604312 472 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC073114.1-201ENST00000612027 490 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC135507.2-201ENST00000612443 309 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AL589743.7-201ENST00000612637 233 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AP001506.1-201ENST00000615444 211 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC022079.1-201ENST00000621546 602 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 PISRT1-201ENST00000626175 531 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 AC110994.2-201ENST00000635481 492 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 U6.99-201ENST00000637524 83 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 ADAM3A-203ENST00000461344 2157 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.71□□□□□ -1.98
CASC4Q6P4E1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.71□□□□□ -1.98
CASC4Q6P4E1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 RN7SKP226-201ENST00000364912 300 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 RNU6-169P-201ENST00000365336 107 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 Z98749.2-208ENST00000381646 500 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC096664.2-201ENST00000411843 406 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 OR51A5P-201ENST00000415429 942 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 ISCA1P6-201ENST00000427740 390 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 RPL36AP6-201ENST00000435770 321 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 RPS15AP7-201ENST00000439294 405 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 BRK1P2-201ENST00000442875 223 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC090525.1-201ENST00000479116 478 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC026801.1-201ENST00000497178 464 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 SCARNA24.1-201ENST00000516465 137 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 Vault.3-201ENST00000516676 95 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC025755.1-201ENST00000521306 278 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 MIR3682-201ENST00000581338 84 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AL590229.1-201ENST00000603497 542 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 AC090578.1-201ENST00000604955 591 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 OR2AS2P-201ENST00000606902 342 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 MIR3974-201ENST00000637126 96 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 MIR7515-201ENST00000637837 67 ntBASIC2.7□□□□□ -1.98
CASC4Q6P4E1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CASC4Q6P4E1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CASC4Q6P4E1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms