Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU1-73P-201ENST00000383971 164 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC107081.1-201ENST00000414975 361 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 USP9YP13-201ENST00000417797 480 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC092047.1-201ENST00000424997 240 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC010153.1-201ENST00000432862 727 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AL445567.1-201ENST00000439121 144 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC096638.1-201ENST00000444678 216 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 COX6CP12-201ENST00000446748 202 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 WASF1P1-201ENST00000447560 1131 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AL590365.1-201ENST00000450788 243 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC008571.1-201ENST00000467232 300 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 RPL23AP11-201ENST00000475260 469 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC138853.1-201ENST00000503549 823 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC092436.1-201ENST00000506450 503 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 MRPS36P2-201ENST00000512569 299 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 RNA5SP82-201ENST00000516707 92 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 RNU6-826P-201ENST00000516827 104 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 DEFB108A-201ENST00000530110 222 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 MIR1273D-201ENST00000577266 86 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 MIR5697-201ENST00000578045 78 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 MIR3915-201ENST00000578518 97 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 MIR4293-201ENST00000584305 78 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AP000860.1-201ENST00000605250 559 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC090970.3-201ENST00000612566 866 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC104010.1-201ENST00000616889 150 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 AC091931.1-201ENST00000623488 728 ntBASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.71□□□□□ -1.98
SHROOM1Q2M3G4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 RNU5A-8P-201ENST00000364102 114 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 RNY3P13-201ENST00000365542 102 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AL591416.1-201ENST00000404015 867 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AL031577.2-201ENST00000404133 280 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 RN7SKP192-201ENST00000411291 327 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 RPL36AP6-201ENST00000435770 321 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 HMGB3P12-201ENST00000438745 556 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AC005094.1-201ENST00000440420 368 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 RNU6-1003P-201ENST00000517099 105 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 IGKV3-31-201ENST00000523109 329 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AC023824.2-201ENST00000566185 400 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 MIR3146-201ENST00000580367 79 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AC090616.3-201ENST00000582184 217 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AC008498.1-201ENST00000613012 531 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AC025594.3-201ENST00000613068 790 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 AC006338.1-201ENST00000618453 749 ntBASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SHROOM1Q2M3G4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 RNU1-91P-201ENST00000364746 163 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 SNORA41-201ENST00000384675 132 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AF228730.1-201ENST00000397972 663 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 RN7SKP32-201ENST00000410167 303 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AL513331.1-201ENST00000411908 397 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AC096649.2-201ENST00000416186 393 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 DPH3P2-201ENST00000422618 250 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AL365203.2-201ENST00000423444 196 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 ZNF863P-201ENST00000426746 417 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AC093106.2-201ENST00000428212 385 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 USP12PX-201ENST00000432383 1057 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 MTND1P30-201ENST00000441241 901 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 RPL12P25-201ENST00000455592 494 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 RPL30P6-201ENST00000475925 342 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AC022616.6-201ENST00000520479 119 ntBASIC2.69□□□□□ -1.98
SHROOM1Q2M3G4 AC107934.1-201ENST00000522215 217 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms