Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 HMGB1P12-201ENST00000438594 598 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.33□□□□□ -1.72
SSRP1Q08945 AC026801.1-201ENST00000497178 464 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 AC025423.5-201ENST00000550230 219 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 AC107016.1-201ENST00000550463 337 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.33□□□□□ -1.72
SSRP1Q08945 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.33□□□□□ -1.72
SSRP1Q08945 AC136601.2-201ENST00000604356 474 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 MIR1302-2-201ENST00000607096 138 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSRP1Q08945 AC006504.1-201ENST00000562493 3666 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSRP1Q08945 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSRP1Q08945 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.33□□□□□ -1.72
SSRP1Q08945 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.33□□□□□ -1.72
SSRP1Q08945 AL049641.1-201ENST00000441055 1948 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.32□□□□□ -1.72
SSRP1Q08945 AC090740.1-201ENST00000623193 2262 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSRP1Q08945 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSRP1Q08945 RN7SKP280-201ENST00000364196 304 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 RNU6-214P-201ENST00000384130 107 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 MIR325-201ENST00000385260 98 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 RNU2-68P-201ENST00000410878 191 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 AL354751.2-201ENST00000415471 210 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 YPEL5P1-201ENST00000419731 367 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 SKA2P1-201ENST00000425592 390 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 RPS4XP13-201ENST00000483219 789 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.32□□□□□ -1.72
SSRP1Q08945 RNU1-86P-201ENST00000516108 154 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 MIR892C-201ENST00000516410 77 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 RN7SKP83-201ENST00000516512 178 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 RNU1-107P-201ENST00000516617 154 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 RNA5SP165-201ENST00000517142 115 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.32□□□□□ -1.72
SSRP1Q08945 AC026371.1-201ENST00000551867 419 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.32□□□□□ -1.72
SSRP1Q08945 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.32□□□□□ -1.72
SSRP1Q08945 AC100830.2-201ENST00000581636 240 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.32□□□□□ -1.72
SSRP1Q08945 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.32□□□□□ -1.72
SSRP1Q08945 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.32□□□□□ -1.72
SSRP1Q08945 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSRP1Q08945 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SSRP1Q08945 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSRP1Q08945 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.31□□□□□ -1.72
SSRP1Q08945 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSRP1Q08945 Y_RNA.324-201ENST00000365165 102 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSRP1Q08945 Y_RNA.482-201ENST00000384377 111 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 SNORA48.7-201ENST00000391302 135 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 HSPE1P26-201ENST00000405341 275 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 RNU6-370P-201ENST00000411008 104 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC092047.1-201ENST00000424997 240 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 RPL7P37-201ENST00000425095 738 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 MTCO2P12-201ENST00000427426 682 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AL512844.2-201ENST00000433990 593 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.31□□□□□ -1.72
SSRP1Q08945 AL133162.1-201ENST00000463228 453 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC130509.1-201ENST00000464158 433 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC011005.2-201ENST00000487324 359 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 RNU6-1282P-201ENST00000516735 96 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 Y_RNA.718-201ENST00000517110 102 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.31□□□□□ -1.72
SSRP1Q08945 AC009902.1-201ENST00000519351 183 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC008011.1-201ENST00000545989 227 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 ZNF192P1-203ENST00000565888 810 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC106785.1-201ENST00000565935 262 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 MIR5187-201ENST00000583479 76 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC020914.4-201ENST00000597690 277 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 NUTF2P8-201ENST00000604593 363 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC004805.2-201ENST00000605382 482 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AL110115.1-201ENST00000614396 364 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 RMST_9.1-201ENST00000619945 193 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.31□□□□□ -1.72
SSRP1Q08945 MTND4LP32-201ENST00000636111 270 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.31□□□□□ -1.72
SSRP1Q08945 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.31□□□□□ -1.72
SSRP1Q08945 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.31□□□□□ -1.72
SSRP1Q08945 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSRP1Q08945 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.3□□□□□ -1.72
SSRP1Q08945 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSRP1Q08945 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.3□□□□□ -1.72
SSRP1Q08945 AC138393.1-203ENST00000327086 343 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 SNORD3E-201ENST00000362899 217 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 RNU1-18P-201ENST00000363062 164 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 RNU1-64P-201ENST00000365443 163 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 Y_RNA.394-201ENST00000383942 103 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 RNU6-1227P-201ENST00000383981 107 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 SNORD116-29-201ENST00000384516 83 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 RNY4P36-201ENST00000391116 96 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 AL391417.1-201ENST00000404100 426 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 AF228730.4-201ENST00000421457 183 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 HMGB1P9-201ENST00000429856 646 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 AC092573.2-201ENST00000434546 243 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 SNRPEP9-201ENST00000436794 238 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms