Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL160236.1-201ENST00000556317 195 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 MIR3198-2-201ENST00000577868 80 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 AC012254.4-201ENST00000588843 273 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.34□□□□□ -2.36
HSPG2P98160 AC018755.4-201ENST00000619715 454 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 ZNF29P-201ENST00000225587 168 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 RNA5SP252-201ENST00000391131 119 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 RPL21P66-201ENST00000426566 466 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 RPL23AP33-201ENST00000442301 452 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
HSPG2P98160 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 CYCSP2-201ENST00000558168 301 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 AC024060.1-201ENST00000607052 494 ntBASIC0.34□□□□□ -2.36
HSPG2P98160 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.33□□□□□ -2.36
HSPG2P98160 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
HSPG2P98160 RNU4-67P-201ENST00000364569 141 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 MTND2P8-201ENST00000450555 1025 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 TPMTP4-201ENST00000450749 678 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 CIR1P1-201ENST00000524055 1133 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AL021879.1-201ENST00000611756 288 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.33□□□□□ -2.36
HSPG2P98160 MIR198-201ENST00000637333 62 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 FAM157B-203ENST00000639350 358 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
HSPG2P98160 SNORA22-201ENST00000383907 134 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 SNORA22C-201ENST00000384614 134 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 VN1R36P-201ENST00000414936 291 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 RPS15AP40-201ENST00000419621 391 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AL121578.1-201ENST00000428051 892 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.33□□□□□ -2.36
HSPG2P98160 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.33□□□□□ -2.36
HSPG2P98160 RPS24P6-201ENST00000452670 400 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AC087588.1-201ENST00000462203 316 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 HMGN2P9-201ENST00000476875 229 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AC112518.2-201ENST00000508565 425 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AC108157.1-201ENST00000510511 539 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AP003355.1-201ENST00000518956 587 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.33□□□□□ -2.36
HSPG2P98160 MZT1P2-201ENST00000604387 248 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AP006248.3-201ENST00000623580 594 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.33□□□□□ -2.36
HSPG2P98160 AC245060.5-201ENST00000610778 3293 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.33□□□□□ -2.36
HSPG2P98160 UBE2V2P3-201ENST00000433562 437 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.33□□□□□ -2.36
HSPG2P98160 SNORA48.10-201ENST00000516965 160 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
HSPG2P98160 MIR4422-201ENST00000581938 83 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AL078605.1-201ENST00000603529 500 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AL355802.3-201ENST00000607571 545 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 AL138880.2-201ENST00000616214 239 ntBASIC0.33□□□□□ -2.36
HSPG2P98160 CR848007.1-201ENST00000442354 1699 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
HSPG2P98160 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
HSPG2P98160 MTCO1P56-201ENST00000401674 224 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 RPS25P9-201ENST00000435591 252 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 AC073614.1-201ENST00000438690 650 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.32□□□□□ -2.36
HSPG2P98160 RNU7-26P-201ENST00000458980 63 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 HMGB1P22-201ENST00000505315 124 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HSPG2P98160 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.32□□□□□ -2.36
HSPG2P98160 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.32□□□□□ -2.36
HSPG2P98160 AC012213.4-201ENST00000606457 354 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.32□□□□□ -2.36
HSPG2P98160 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.32□□□□□ -2.36
HSPG2P98160 AC006213.5-201ENST00000619673 288 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.32□□□□□ -2.36
HSPG2P98160 AC091925.2-201ENST00000625059 256 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.32□□□□□ -2.36
HSPG2P98160 SNORA63.3-201ENST00000362682 132 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 RNU6-1305P-201ENST00000364353 104 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 RNU6-1222P-201ENST00000384615 107 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.32□□□□□ -2.36
HSPG2P98160 AC109927.2-201ENST00000506416 303 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 AC133963.2-201ENST00000513686 578 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.32□□□□□ -2.36
HSPG2P98160 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.32□□□□□ -2.36
HSPG2P98160 SNRPGP17-201ENST00000603780 214 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 AC135507.1-201ENST00000607214 561 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 BTF3L4P2-201ENST00000392798 346 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.32□□□□□ -2.36
HSPG2P98160 AL353706.1-201ENST00000436728 494 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 MTCYBP34-201ENST00000439552 670 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 PTENP1-201ENST00000447117 1215 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.32□□□□□ -2.36
HSPG2P98160 AL031183.1-201ENST00000457667 207 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 RNU5F-8P-201ENST00000515941 111 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
HSPG2P98160 AC006963.1-201ENST00000624003 1052 ntBASIC0.32□□□□□ -2.36
HSPG2P98160 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.32□□□□□ -2.36
HSPG2P98160 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HSPG2P98160 RN7SKP61-201ENST00000410642 295 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.31□□□□□ -2.36
HSPG2P98160 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.31□□□□□ -2.36
HSPG2P98160 MTCYBP29-201ENST00000436327 1006 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 MTATP6P7-201ENST00000453315 681 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AC015908.1-201ENST00000478739 476 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.31□□□□□ -2.36
HSPG2P98160 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms