Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
HERVK_113P62684 RNU6-562P-201ENST00000362731 107 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 RNU6-1188P-201ENST00000363795 107 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 Y_RNA.187-201ENST00000363918 113 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 RNU1-33P-201ENST00000364249 162 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.23□□□□□ -1.73
HERVK_113P62684 Y_RNA.422-201ENST00000384054 114 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 RNU6-738P-201ENST00000384531 106 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 RNU6-308P-201ENST00000390957 107 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 NDUFB4P4-201ENST00000404822 243 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 RN7SKP177-201ENST00000410567 355 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 AL669831.1-202ENST00000428504 417 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.23□□□□□ -1.73
HERVK_113P62684 AL591704.1-201ENST00000432574 275 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 RPL26P6-201ENST00000440913 438 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 RBMY2UP-201ENST00000453474 324 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 RNU7-152P-201ENST00000458982 64 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.23□□□□□ -1.73
HERVK_113P62684 Vault.1-201ENST00000516474 102 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 Y_RNA.711-201ENST00000516993 102 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HERVK_113P62684 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.23□□□□□ -1.73
HERVK_113P62684 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.23□□□□□ -1.73
HERVK_113P62684 AC005000.2-201ENST00000605468 310 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 AC116312.1-201ENST00000606841 314 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 FAM157A-202ENST00000615155 405 ntBASIC4.23□□□□□ -1.73
HERVK_113P62684 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HERVK_113P62684 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERVK_113P62684 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.22□□□□□ -1.73
HERVK_113P62684 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
HERVK_113P62684 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERVK_113P62684 RNA5SP235-201ENST00000365411 114 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERVK_113P62684 Y_RNA.482-201ENST00000384377 111 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 RNU6-817P-201ENST00000391083 104 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.22□□□□□ -1.73
HERVK_113P62684 BX842559.1-201ENST00000419615 532 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 AL160275.3-201ENST00000423876 471 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 MTATP6P4-201ENST00000427725 675 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.22□□□□□ -1.73
HERVK_113P62684 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.22□□□□□ -1.73
HERVK_113P62684 SNAP23P1-201ENST00000433229 246 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 USP9YP7-201ENST00000436723 430 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.22□□□□□ -1.73
HERVK_113P62684 USP9YP32-201ENST00000452432 430 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.22□□□□□ -1.73
HERVK_113P62684 AC117503.1-201ENST00000472241 394 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.22□□□□□ -1.73
HERVK_113P62684 SNORA70.18-201ENST00000516696 98 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 RN7SKP57-201ENST00000517248 293 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.22□□□□□ -1.73
HERVK_113P62684 BDH2P1-201ENST00000602288 736 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 AC019193.3-201ENST00000609144 554 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 MIR6128-201ENST00000615528 109 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 ATP5A1P2-202ENST00000616464 443 ntBASIC4.22□□□□□ -1.73
HERVK_113P62684 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HERVK_113P62684 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERVK_113P62684 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
HERVK_113P62684 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.21□□□□□ -1.73
HERVK_113P62684 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
HERVK_113P62684 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HERVK_113P62684 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.21□□□□□ -1.74
HERVK_113P62684 RNU5A-1-201ENST00000362698 116 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 Y_RNA.197-201ENST00000364004 102 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 SNORA63C-201ENST00000364578 129 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 SNORA33.2-201ENST00000365413 134 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 RNU6-1160P-201ENST00000384546 104 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 RPS12P24-201ENST00000412619 387 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AC080125.1-201ENST00000414888 684 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 RAC1P3-201ENST00000416129 580 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.21□□□□□ -1.74
HERVK_113P62684 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.21□□□□□ -1.74
HERVK_113P62684 FTH1P6-201ENST00000430768 320 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.21□□□□□ -1.74
HERVK_113P62684 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.21□□□□□ -1.74
HERVK_113P62684 AC133473.1-201ENST00000455173 299 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 MLLT10P2-201ENST00000506434 249 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 MTCYBP40-201ENST00000509390 1135 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.21□□□□□ -1.74
HERVK_113P62684 RNU6-1069P-201ENST00000516612 133 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 RNU6-1213P-201ENST00000517075 94 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.21□□□□□ -1.74
HERVK_113P62684 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.21□□□□□ -1.74
HERVK_113P62684 AC008011.1-201ENST00000545989 227 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AL355836.1-201ENST00000555951 870 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AC012119.1-201ENST00000603184 222 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AC006077.1-201ENST00000604746 343 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AP000942.4-201ENST00000604811 241 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 BRDTP1-201ENST00000605735 677 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 MIR15A-201ENST00000607334 83 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AL355802.3-201ENST00000607571 545 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 MIR8058-201ENST00000615737 89 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 AC010378.1-201ENST00000619270 362 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.21□□□□□ -1.74
HERVK_113P62684 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HERVK_113P62684 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.21□□□□□ -1.74
HERVK_113P62684 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms