Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC104563.1-201ENST00000476147 376 ntBASIC1.6□□□□□ -2.15
ACTBP60709 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.6□□□□□ -2.15
ACTBP60709 HMGB1P35-201ENST00000503360 598 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ACTBP60709 MTND5P13-201ENST00000513046 1079 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.6□□□□□ -2.15
ACTBP60709 RNU6-703P-201ENST00000516946 107 ntBASIC1.6□□□□□ -2.15
ACTBP60709 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.6□□□□□ -2.15
ACTBP60709 AL132657.2-201ENST00000564417 358 ntBASIC1.6□□□□□ -2.15
ACTBP60709 DEFB122-202ENST00000569013 197 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC026271.5-201ENST00000577873 130 ntBASIC1.6□□□□□ -2.15
ACTBP60709 MIR3167-201ENST00000579623 85 ntBASIC1.6□□□□□ -2.15
ACTBP60709 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.6□□□□□ -2.15
ACTBP60709 UBE2L4-201ENST00000587688 464 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC009237.15-201ENST00000610252 501 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.6□□□□□ -2.15
ACTBP60709 DUSP12P1-201ENST00000612874 516 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.6□□□□□ -2.15
ACTBP60709 AL158801.5-201ENST00000623123 465 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC099063.3-201ENST00000642066 185 ntBASIC1.6□□□□□ -2.15
ACTBP60709 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.6□□□□□ -2.15
ACTBP60709 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.59□□□□□ -2.15
ACTBP60709 DDX43P2-201ENST00000604753 1354 ntBASIC1.59□□□□□ -2.15
ACTBP60709 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.15
ACTBP60709 RNU4-51P-201ENST00000364206 140 ntBASIC1.59□□□□□ -2.15
ACTBP60709 MIR1302-8-201ENST00000408342 128 ntBASIC1.59□□□□□ -2.15
ACTBP60709 POLHP1-201ENST00000411806 470 ntBASIC1.59□□□□□ -2.15
ACTBP60709 MTND4P3-201ENST00000417829 541 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AL449283.1-202ENST00000418249 604 ntBASIC1.59□□□□□ -2.15
ACTBP60709 PGBD4P6-201ENST00000421501 610 ntBASIC1.59□□□□□ -2.15
ACTBP60709 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.59□□□□□ -2.15
ACTBP60709 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.59□□□□□ -2.15
ACTBP60709 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
ACTBP60709 MTCO1P53-201ENST00000441633 699 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.59□□□□□ -2.15
ACTBP60709 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.59□□□□□ -2.15
ACTBP60709 FABP5P15-201ENST00000453566 214 ntBASIC1.59□□□□□ -2.15
ACTBP60709 snoU13.26-201ENST00000459452 105 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.59□□□□□ -2.15
ACTBP60709 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.59□□□□□ -2.15
ACTBP60709 HSPE1P18-201ENST00000517602 280 ntBASIC1.59□□□□□ -2.15
ACTBP60709 RANP3-201ENST00000530970 276 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.59□□□□□ -2.15
ACTBP60709 ROCK1P1-201ENST00000573767 549 ntBASIC1.59□□□□□ -2.15
ACTBP60709 NRBF2P1-201ENST00000587407 859 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AF038458.1-201ENST00000588406 262 ntBASIC1.59□□□□□ -2.15
ACTBP60709 BNIP3P25-201ENST00000596023 559 ntBASIC1.59□□□□□ -2.15
ACTBP60709 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.59□□□□□ -2.15
ACTBP60709 AC021171.1-201ENST00000603137 706 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AL078605.1-201ENST00000603529 500 ntBASIC1.59□□□□□ -2.15
ACTBP60709 SEPT7P9-203ENST00000604116 343 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AC024060.1-201ENST00000607052 494 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AC009233.1-201ENST00000616477 371 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AC231657.1-201ENST00000624313 397 ntBASIC1.59□□□□□ -2.15
ACTBP60709 OR1S1-201ENST00000624470 978 ntBASIC1.59□□□□□ -2.15
ACTBP60709 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.59□□□□□ -2.15
ACTBP60709 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
ACTBP60709 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
ACTBP60709 SNORA63.3-201ENST00000362682 132 ntBASIC1.58□□□□□ -2.16
ACTBP60709 Y_RNA.110-201ENST00000363220 99 ntBASIC1.58□□□□□ -2.16
ACTBP60709 RNU6-1167P-201ENST00000363227 94 ntBASIC1.58□□□□□ -2.16
ACTBP60709 RNU6-744P-201ENST00000365557 107 ntBASIC1.58□□□□□ -2.16
ACTBP60709 RNU6-432P-201ENST00000384196 109 ntBASIC1.58□□□□□ -2.16
ACTBP60709 RNU6-1316P-201ENST00000384242 108 ntBASIC1.58□□□□□ -2.16
ACTBP60709 SNORA8-201ENST00000384574 139 ntBASIC1.58□□□□□ -2.16
ACTBP60709 RNU6-19P-201ENST00000384718 107 ntBASIC1.58□□□□□ -2.16
ACTBP60709 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AL590084.1-201ENST00000407885 387 ntBASIC1.58□□□□□ -2.16
ACTBP60709 RPS20P15-201ENST00000412792 311 ntBASIC1.58□□□□□ -2.16
ACTBP60709 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.58□□□□□ -2.16
ACTBP60709 UBE2FP1-201ENST00000416536 447 ntBASIC1.58□□□□□ -2.16
ACTBP60709 TIMM9P2-201ENST00000419324 266 ntBASIC1.58□□□□□ -2.16
ACTBP60709 ISCA1P1-201ENST00000426679 387 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.58□□□□□ -2.16
ACTBP60709 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.58□□□□□ -2.16
ACTBP60709 AL161651.1-201ENST00000440882 223 ntBASIC1.58□□□□□ -2.16
ACTBP60709 MTATP6P30-201ENST00000443540 664 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AC010095.1-201ENST00000443543 144 ntBASIC1.58□□□□□ -2.16
ACTBP60709 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.58□□□□□ -2.16
ACTBP60709 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.58□□□□□ -2.16
ACTBP60709 AC008481.1-201ENST00000463278 396 ntBASIC1.58□□□□□ -2.16
ACTBP60709 UBL5P3-201ENST00000475112 231 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AC069528.1-202ENST00000482888 637 ntBASIC1.58□□□□□ -2.16
ACTBP60709 MTAPP1-201ENST00000489154 819 ntBASIC1.58□□□□□ -2.16
ACTBP60709 RPS15AP36-201ENST00000492022 382 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AC106872.3-201ENST00000495104 446 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AC104685.1-201ENST00000502445 371 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.58□□□□□ -2.16
ACTBP60709 RNU1-41P-201ENST00000516161 162 ntBASIC1.58□□□□□ -2.16
ACTBP60709 RNU1-48P-201ENST00000516400 162 ntBASIC1.58□□□□□ -2.16
ACTBP60709 RNA5SP165-201ENST00000517142 115 ntBASIC1.58□□□□□ -2.16
ACTBP60709 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.58□□□□□ -2.16
ACTBP60709 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.58□□□□□ -2.16
ACTBP60709 MRPS36P5-201ENST00000551909 298 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AL136520.1-202ENST00000555494 763 ntBASIC1.58□□□□□ -2.16
ACTBP60709 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.58□□□□□ -2.16
ACTBP60709 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.58□□□□□ -2.16
ACTBP60709 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms