Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.68□□□□□ -1.98
PEX3P56589 RNU6-1282P-201ENST00000516735 96 ntBASIC2.68□□□□□ -1.98
PEX3P56589 RNU6-1220P-201ENST00000517126 108 ntBASIC2.68□□□□□ -1.98
PEX3P56589 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.68□□□□□ -1.98
PEX3P56589 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.68□□□□□ -1.98
PEX3P56589 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.68□□□□□ -1.98
PEX3P56589 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.68□□□□□ -1.98
PEX3P56589 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.68□□□□□ -1.98
PEX3P56589 HMGB1P14-201ENST00000557424 591 ntBASIC2.68□□□□□ -1.98
PEX3P56589 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.68□□□□□ -1.98
PEX3P56589 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.68□□□□□ -1.98
PEX3P56589 MIR4528-201ENST00000577763 90 ntBASIC2.68□□□□□ -1.98
PEX3P56589 AC079089.3-201ENST00000603094 673 ntBASIC2.68□□□□□ -1.98
PEX3P56589 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.68□□□□□ -1.98
PEX3P56589 AC109347.2-201ENST00000610220 349 ntBASIC2.68□□□□□ -1.98
PEX3P56589 AP003122.6-201ENST00000623831 495 ntBASIC2.68□□□□□ -1.98
PEX3P56589 CTSLP2-204ENST00000629029 392 ntBASIC2.68□□□□□ -1.98
PEX3P56589 OR5H6-203ENST00000642105 978 ntBASIC2.68□□□□□ -1.98
PEX3P56589 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.68□□□□□ -1.98
PEX3P56589 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
PEX3P56589 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PEX3P56589 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PEX3P56589 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.67□□□□□ -1.98
PEX3P56589 AC022336.2-201ENST00000568966 2538 ntBASIC2.67□□□□□ -1.98
PEX3P56589 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.67□□□□□ -1.98
PEX3P56589 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PEX3P56589 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PEX3P56589 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PEX3P56589 Y_RNA.22-201ENST00000362492 102 ntBASIC2.67□□□□□ -1.98
PEX3P56589 RNU4-24P-201ENST00000364565 139 ntBASIC2.67□□□□□ -1.98
PEX3P56589 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PEX3P56589 RNU6-39P-201ENST00000384344 107 ntBASIC2.67□□□□□ -1.98
PEX3P56589 SNORA67.4-201ENST00000384688 142 ntBASIC2.67□□□□□ -1.98
PEX3P56589 MIR325-201ENST00000385260 98 ntBASIC2.67□□□□□ -1.98
PEX3P56589 DEFB108C-201ENST00000400154 252 ntBASIC2.67□□□□□ -1.98
PEX3P56589 NDUFS5P1-201ENST00000405668 289 ntBASIC2.67□□□□□ -1.98
PEX3P56589 FAT1P1-201ENST00000406588 507 ntBASIC2.67□□□□□ -1.98
PEX3P56589 BTF3L4P1-201ENST00000413813 468 ntBASIC2.67□□□□□ -1.98
PEX3P56589 TMEM167AP1-201ENST00000423409 219 ntBASIC2.67□□□□□ -1.98
PEX3P56589 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.67□□□□□ -1.98
PEX3P56589 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.67□□□□□ -1.98
PEX3P56589 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.67□□□□□ -1.98
PEX3P56589 SNRPGP6-201ENST00000451124 220 ntBASIC2.67□□□□□ -1.98
PEX3P56589 MTND2P24-201ENST00000453434 806 ntBASIC2.67□□□□□ -1.98
PEX3P56589 AC027673.1-201ENST00000456245 405 ntBASIC2.67□□□□□ -1.98
PEX3P56589 SNORD97-201ENST00000459187 142 ntBASIC2.67□□□□□ -1.98
PEX3P56589 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.67□□□□□ -1.98
PEX3P56589 MTND4P2-201ENST00000507767 1203 ntBASIC2.67□□□□□ -1.98
PEX3P56589 NDUFB4P2-201ENST00000509515 391 ntBASIC2.67□□□□□ -1.98
PEX3P56589 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.67□□□□□ -1.98
PEX3P56589 TBCAP3-201ENST00000512475 312 ntBASIC2.67□□□□□ -1.98
PEX3P56589 MTCO3P28-201ENST00000513351 515 ntBASIC2.67□□□□□ -1.98
PEX3P56589 SNORA18.6-201ENST00000516792 115 ntBASIC2.67□□□□□ -1.98
PEX3P56589 AP002453.2-201ENST00000533503 320 ntBASIC2.67□□□□□ -1.98
PEX3P56589 AC006362.1-201ENST00000567392 174 ntBASIC2.67□□□□□ -1.98
PEX3P56589 MIR3913-1-201ENST00000577744 102 ntBASIC2.67□□□□□ -1.98
PEX3P56589 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.67□□□□□ -1.98
PEX3P56589 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.67□□□□□ -1.98
PEX3P56589 AC019159.1-201ENST00000605094 187 ntBASIC2.67□□□□□ -1.98
PEX3P56589 AP002360.4-201ENST00000606980 481 ntBASIC2.67□□□□□ -1.98
PEX3P56589 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
PEX3P56589 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PEX3P56589 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PEX3P56589 AL359693.1-201ENST00000614959 2407 ntBASIC2.66□□□□□ -1.98
PEX3P56589 RNU6-169P-201ENST00000365336 107 ntBASIC2.66□□□□□ -1.98
PEX3P56589 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.66□□□□□ -1.98
PEX3P56589 XGY1-201ENST00000381172 446 ntBASIC2.66□□□□□ -1.98
PEX3P56589 RNU6-217P-201ENST00000384164 104 ntBASIC2.66□□□□□ -1.98
PEX3P56589 RNU6-1119P-201ENST00000384349 108 ntBASIC2.66□□□□□ -1.98
PEX3P56589 RPS3AP36-201ENST00000398190 775 ntBASIC2.66□□□□□ -1.98
PEX3P56589 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.66□□□□□ -1.98
PEX3P56589 RNU6-195P-201ENST00000411352 109 ntBASIC2.66□□□□□ -1.98
PEX3P56589 BX682237.1-201ENST00000415016 335 ntBASIC2.66□□□□□ -1.98
PEX3P56589 MTCO3P5-201ENST00000433620 714 ntBASIC2.66□□□□□ -1.98
PEX3P56589 PIGFP3-201ENST00000441918 722 ntBASIC2.66□□□□□ -1.98
PEX3P56589 RNU6-420P-201ENST00000458780 107 ntBASIC2.66□□□□□ -1.98
PEX3P56589 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.66□□□□□ -1.98
PEX3P56589 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PEX3P56589 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.66□□□□□ -1.98
PEX3P56589 SNORA31.1-201ENST00000515993 133 ntBASIC2.66□□□□□ -1.98
PEX3P56589 SNORA31.5-201ENST00000516190 133 ntBASIC2.66□□□□□ -1.98
PEX3P56589 RNU6-390P-201ENST00000516259 103 ntBASIC2.66□□□□□ -1.98
PEX3P56589 RNU6-1092P-201ENST00000516955 87 ntBASIC2.66□□□□□ -1.98
PEX3P56589 AC090572.1-201ENST00000519251 160 ntBASIC2.66□□□□□ -1.98
PEX3P56589 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.66□□□□□ -1.98
PEX3P56589 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.66□□□□□ -1.98
PEX3P56589 MIR4446-201ENST00000578505 67 ntBASIC2.66□□□□□ -1.98
PEX3P56589 MIR3682-201ENST00000581338 84 ntBASIC2.66□□□□□ -1.98
PEX3P56589 NRBF2P1-201ENST00000587407 859 ntBASIC2.66□□□□□ -1.98
PEX3P56589 AC040904.1-201ENST00000590850 223 ntBASIC2.66□□□□□ -1.98
PEX3P56589 AL356575.1-201ENST00000603008 283 ntBASIC2.66□□□□□ -1.98
PEX3P56589 AC136601.2-201ENST00000604356 474 ntBASIC2.66□□□□□ -1.98
PEX3P56589 AC099842.1-201ENST00000619919 596 ntBASIC2.66□□□□□ -1.98
PEX3P56589 AC025034.2-201ENST00000623264 286 ntBASIC2.66□□□□□ -1.98
PEX3P56589 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
PEX3P56589 TPTE2P4-201ENST00000258589 1605 ntBASIC2.65□□□□□ -1.98
PEX3P56589 RNA5SP289-201ENST00000362332 137 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RNU6-960P-201ENST00000364056 120 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RNY4P34-201ENST00000364779 95 ntBASIC2.65□□□□□ -1.99
PEX3P56589 Y_RNA.359-201ENST00000365498 102 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms