Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MRE11P49959 RNU6-1284P-201ENST00000363701 100 ntBASIC4.28□□□□□ -1.72
MRE11P49959 SNORD113-7-201ENST00000363762 77 ntBASIC4.28□□□□□ -1.72
MRE11P49959 RNU6-82P-201ENST00000363970 107 ntBASIC4.28□□□□□ -1.72
MRE11P49959 RNA5SP235-201ENST00000365411 114 ntBASIC4.28□□□□□ -1.72
MRE11P49959 SNORA33.2-201ENST00000365413 134 ntBASIC4.28□□□□□ -1.72
MRE11P49959 Y_RNA.493-201ENST00000384422 102 ntBASIC4.28□□□□□ -1.72
MRE11P49959 MIR199A2-201ENST00000385289 110 ntBASIC4.28□□□□□ -1.72
MRE11P49959 RNU6-821P-201ENST00000390995 107 ntBASIC4.28□□□□□ -1.72
MRE11P49959 RN7SKP158-201ENST00000410453 326 ntBASIC4.28□□□□□ -1.72
MRE11P49959 RNU4-46P-201ENST00000410818 138 ntBASIC4.28□□□□□ -1.72
MRE11P49959 RNA5SP31-201ENST00000411144 127 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AC074085.1-201ENST00000413598 418 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MRE11P49959 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.28□□□□□ -1.72
MRE11P49959 ARF4P2-201ENST00000430209 526 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AL159987.2-201ENST00000432754 307 ntBASIC4.28□□□□□ -1.72
MRE11P49959 RPL21P112-201ENST00000434403 463 ntBASIC4.28□□□□□ -1.72
MRE11P49959 NDUFB1P1-201ENST00000435191 180 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.28□□□□□ -1.72
MRE11P49959 RPS27P29-201ENST00000463110 252 ntBASIC4.28□□□□□ -1.72
MRE11P49959 RPL32P34-201ENST00000486380 400 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AC110792.1-201ENST00000491826 472 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AP001086.1-201ENST00000494882 321 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AC108078.2-201ENST00000510750 236 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.28□□□□□ -1.72
MRE11P49959 HMGN1P28-201ENST00000521340 364 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AC093331.1-201ENST00000521474 169 ntBASIC4.28□□□□□ -1.72
MRE11P49959 APOOP3-201ENST00000536787 586 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AP000763.2-201ENST00000540641 163 ntBASIC4.28□□□□□ -1.72
MRE11P49959 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.28□□□□□ -1.72
MRE11P49959 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AC012531.5-201ENST00000611375 151 ntBASIC4.28□□□□□ -1.72
MRE11P49959 AC008121.3-201ENST00000618726 433 ntBASIC4.28□□□□□ -1.72
MRE11P49959 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.28□□□□□ -1.72
MRE11P49959 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MRE11P49959 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
MRE11P49959 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
MRE11P49959 TPTE2P4-201ENST00000258589 1605 ntBASIC4.28□□□□□ -1.72
MRE11P49959 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MRE11P49959 MFSD8-236ENST00000641509 4050 ntBASIC4.27□□□□□ -1.73
MRE11P49959 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MRE11P49959 RNU6-1252P-201ENST00000363054 104 ntBASIC4.27□□□□□ -1.73
MRE11P49959 SNORD6-201ENST00000365444 73 ntBASIC4.27□□□□□ -1.73
MRE11P49959 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MRE11P49959 Y_RNA.395-201ENST00000383945 109 ntBASIC4.27□□□□□ -1.73
MRE11P49959 Y_RNA.445-201ENST00000384168 102 ntBASIC4.27□□□□□ -1.73
MRE11P49959 RNU6-328P-201ENST00000390887 106 ntBASIC4.27□□□□□ -1.73
MRE11P49959 RPL21P17-201ENST00000397467 475 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AL139095.1-201ENST00000404326 391 ntBASIC4.27□□□□□ -1.73
MRE11P49959 RNU2-37P-201ENST00000410695 177 ntBASIC4.27□□□□□ -1.73
MRE11P49959 RNU6-370P-201ENST00000411008 104 ntBASIC4.27□□□□□ -1.73
MRE11P49959 RNU6-1304P-201ENST00000411374 106 ntBASIC4.27□□□□□ -1.73
MRE11P49959 POLHP1-201ENST00000411806 470 ntBASIC4.27□□□□□ -1.73
MRE11P49959 RPL21P24-201ENST00000413752 448 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AC092447.6-201ENST00000414578 210 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AC245054.2-201ENST00000415639 319 ntBASIC4.27□□□□□ -1.73
MRE11P49959 UBE2FP1-201ENST00000416536 447 ntBASIC4.27□□□□□ -1.73
MRE11P49959 SYF2P2-201ENST00000417620 583 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AL158156.1-201ENST00000422509 473 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AC005517.2-201ENST00000424673 553 ntBASIC4.27□□□□□ -1.73
MRE11P49959 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.27□□□□□ -1.73
MRE11P49959 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.27□□□□□ -1.73
MRE11P49959 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.27□□□□□ -1.73
MRE11P49959 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.27□□□□□ -1.73
MRE11P49959 CYCSP35-201ENST00000451978 304 ntBASIC4.27□□□□□ -1.73
MRE11P49959 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.27□□□□□ -1.73
MRE11P49959 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.27□□□□□ -1.73
MRE11P49959 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.27□□□□□ -1.73
MRE11P49959 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.27□□□□□ -1.73
MRE11P49959 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.27□□□□□ -1.73
MRE11P49959 RPL7P43-201ENST00000478876 753 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.27□□□□□ -1.73
MRE11P49959 RNU6-566P-201ENST00000516790 107 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AC100870.1-201ENST00000522035 505 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AC091516.1-201ENST00000549191 703 ntBASIC4.27□□□□□ -1.73
MRE11P49959 OR11H5P-201ENST00000554039 926 ntBASIC4.27□□□□□ -1.73
MRE11P49959 MIR3671-201ENST00000580455 88 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.27□□□□□ -1.73
MRE11P49959 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.27□□□□□ -1.73
MRE11P49959 AL670379.11-201ENST00000604059 253 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AL670379.10-201ENST00000604330 253 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AL031176.1-201ENST00000604554 466 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AL670379.12-201ENST00000605291 253 ntBASIC4.27□□□□□ -1.73
MRE11P49959 AL670379.9-201ENST00000605428 253 ntBASIC4.27□□□□□ -1.73
MRE11P49959 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.27□□□□□ -1.73
MRE11P49959 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.27□□□□□ -1.73
MRE11P49959 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.27□□□□□ -1.73
MRE11P49959 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.27□□□□□ -1.73
MRE11P49959 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MRE11P49959 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
MRE11P49959 GABPAP-201ENST00000419271 1356 ntBASIC4.27□□□□□ -1.73
MRE11P49959 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MRE11P49959 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MRE11P49959 AL365361.1-201ENST00000566942 3481 ntBASIC4.26□□□□□ -1.73
MRE11P49959 AC103710.2-202ENST00000641454 2853 ntBASIC4.26□□□□□ -1.73
MRE11P49959 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
MRE11P49959 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.26□□□□□ -1.73
MRE11P49959 RNA5SP42-201ENST00000364278 115 ntBASIC4.26□□□□□ -1.73
MRE11P49959 RNA5SP126-201ENST00000365092 109 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms