Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.08□□□□□ -2.08
TNFSF9P41273 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.08□□□□□ -2.08
TNFSF9P41273 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.08□□□□□ -2.08
TNFSF9P41273 SCARNA3-201ENST00000517097 143 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 AP001372.4-201ENST00000524889 472 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.08□□□□□ -2.08
TNFSF9P41273 AC011494.1-201ENST00000596454 237 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 AL391813.1-201ENST00000603098 260 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 AC008121.1-201ENST00000603244 268 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 AL121917.1-203ENST00000605534 577 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 SNORD14A-201ENST00000606526 91 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.08□□□□□ -2.08
TNFSF9P41273 AC004908.2-201ENST00000609090 574 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.08□□□□□ -2.08
TNFSF9P41273 AC097655.1-201ENST00000635075 318 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 U2.21-201ENST00000637295 81 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
TNFSF9P41273 AC106754.1-201ENST00000562632 1513 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 ZNF72P-201ENST00000425869 1908 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TNFSF9P41273 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.07□□□□□ -2.08
TNFSF9P41273 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TNFSF9P41273 AL359704.1-201ENST00000411586 781 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 SSR1P2-201ENST00000415208 787 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.07□□□□□ -2.08
TNFSF9P41273 EIF1AXP1-201ENST00000419267 435 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 GPM6BP2-201ENST00000432046 144 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 GPM6BP1-201ENST00000446387 144 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 MTCO1P27-201ENST00000448269 226 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.07□□□□□ -2.08
TNFSF9P41273 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.07□□□□□ -2.08
TNFSF9P41273 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 LTV1P1-201ENST00000510683 1237 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 MTATP6P9-201ENST00000515039 680 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 RNU6-991P-201ENST00000516168 107 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.07□□□□□ -2.08
TNFSF9P41273 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.07□□□□□ -2.08
TNFSF9P41273 AP001269.3-201ENST00000588718 329 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 AC144521.1-201ENST00000607148 956 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 AC007038.2-201ENST00000608095 740 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TNFSF9P41273 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.07□□□□□ -2.08
TNFSF9P41273 AL139418.1-201ENST00000613613 177 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.07□□□□□ -2.08
TNFSF9P41273 AC079416.3-201ENST00000624479 549 ntBASIC2.07□□□□□ -2.08
TNFSF9P41273 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TNFSF9P41273 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TNFSF9P41273 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
TNFSF9P41273 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.06□□□□□ -2.08
TNFSF9P41273 RNU6-1159P-201ENST00000362933 107 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 RNU6-512P-201ENST00000364438 103 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TNFSF9P41273 RNU6-658P-201ENST00000384606 106 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 RNU6-906P-201ENST00000384700 70 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TNFSF9P41273 MTATP6P20-201ENST00000414147 562 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AL445685.2-201ENST00000422551 342 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AL353729.1-201ENST00000425044 720 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.06□□□□□ -2.08
TNFSF9P41273 RPL36AP53-201ENST00000432891 316 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 FABP5P14-201ENST00000437273 393 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 RPL7P54-201ENST00000438336 674 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 PTENP1-201ENST00000447117 1215 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 MTATP6P7-201ENST00000453315 681 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AC073901.1-201ENST00000462471 408 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 DYNLL1P5-201ENST00000467158 270 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.06□□□□□ -2.08
TNFSF9P41273 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.06□□□□□ -2.08
TNFSF9P41273 AC007182.2-201ENST00000489251 402 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.06□□□□□ -2.08
TNFSF9P41273 FAM92A1P1-201ENST00000528023 890 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AK6P1-201ENST00000540219 478 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TNFSF9P41273 AC021739.1-201ENST00000559631 174 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 MIR4765-201ENST00000585007 77 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.06□□□□□ -2.08
TNFSF9P41273 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.06□□□□□ -2.08
TNFSF9P41273 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.06□□□□□ -2.08
TNFSF9P41273 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.06□□□□□ -2.08
TNFSF9P41273 AL161798.1-201ENST00000604630 131 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AC027449.1-201ENST00000608890 407 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 MIR6845-201ENST00000613182 61 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AC016597.2-201ENST00000613256 341 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 AC245884.12-201ENST00000615364 59 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
TNFSF9P41273 AC007490.1-201ENST00000624321 703 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 MIR7157-201ENST00000635801 60 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.06□□□□□ -2.08
TNFSF9P41273 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TNFSF9P41273 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.06□□□□□ -2.08
TNFSF9P41273 AL139276.1-201ENST00000311910 1001 ntBASIC2.05□□□□□ -2.08
TNFSF9P41273 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.05□□□□□ -2.08
TNFSF9P41273 SNORA3A-201ENST00000364113 130 ntBASIC2.05□□□□□ -2.08
TNFSF9P41273 RNU4-68P-201ENST00000364314 141 ntBASIC2.05□□□□□ -2.08
TNFSF9P41273 RNA5SP125-201ENST00000364843 120 ntBASIC2.05□□□□□ -2.08
TNFSF9P41273 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TNFSF9P41273 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
TNFSF9P41273 AC119751.3-201ENST00000399720 670 ntBASIC2.05□□□□□ -2.08
TNFSF9P41273 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms