Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 TPRKBP2-201ENST00000565969 475 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AL391840.1-201ENST00000571144 367 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AP001094.1-201ENST00000579805 193 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 MIR3146-201ENST00000580367 79 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 MTATP6P3-201ENST00000581686 676 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 MIR5195-201ENST00000583555 115 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 MIR3616-201ENST00000584070 92 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AC245517.5-201ENST00000611529 162 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.93□□□□□ -1.94
HNF4AP41235 AC110491.1-201ENST00000562191 2010 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.93□□□□□ -1.94
HNF4AP41235 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HNF4AP41235 AC073346.2-201ENST00000624724 2058 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC073325.2-201ENST00000339545 159 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 MIR22-201ENST00000362190 85 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 RNU6-1284P-201ENST00000363701 100 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 MRPL42P2-201ENST00000403169 426 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 GSTA9P-201ENST00000406231 611 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC127391.1-201ENST00000411737 98 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 RPL26P27-201ENST00000414397 437 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.92□□□□□ -1.94
HNF4AP41235 MTND3P17-201ENST00000416968 344 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 PIGFP2-201ENST00000421400 651 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.92□□□□□ -1.94
HNF4AP41235 BPY2DP-201ENST00000422208 265 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC007283.2-201ENST00000424739 197 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.92□□□□□ -1.94
HNF4AP41235 AL451074.3-201ENST00000437709 472 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC098831.1-201ENST00000440661 216 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 MTATP6P30-201ENST00000443540 664 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.92□□□□□ -1.94
HNF4AP41235 snoU13.22-201ENST00000459428 104 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC107626.1-201ENST00000471084 183 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC011352.1-201ENST00000512300 793 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC008885.1-201ENST00000514930 301 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 RNU6-64P-201ENST00000517119 105 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 SNORA70.24-201ENST00000517233 118 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 DEFB108A-201ENST00000530110 222 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.92□□□□□ -1.94
HNF4AP41235 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.92□□□□□ -1.94
HNF4AP41235 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.92□□□□□ -1.94
HNF4AP41235 MIR3167-201ENST00000579623 85 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 NRBF2P1-201ENST00000587407 859 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC012493.2-201ENST00000595083 291 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 DPPA3P3-201ENST00000603842 430 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC126118.1-201ENST00000607744 628 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.92□□□□□ -1.94
HNF4AP41235 AL133173.2-201ENST00000614270 90 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AL158209.2-201ENST00000619266 216 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AC124864.2-201ENST00000624736 186 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 AL160394.1-201ENST00000624765 724 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 MIR7515-201ENST00000637837 67 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
HNF4AP41235 AL035425.3-201ENST00000564206 4996 ntBASIC2.92□□□□□ -1.94
HNF4AP41235 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.92□□□□□ -1.94
HNF4AP41235 AC135776.4-201ENST00000624300 1904 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.91□□□□□ -1.94
HNF4AP41235 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HNF4AP41235 Y_RNA.296-201ENST00000364930 108 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 RNU6-282P-201ENST00000365357 103 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 RNU2-68P-201ENST00000410878 191 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.91□□□□□ -1.94
HNF4AP41235 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.91□□□□□ -1.94
HNF4AP41235 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.91□□□□□ -1.94
HNF4AP41235 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.91□□□□□ -1.94
HNF4AP41235 TIMM9P1-201ENST00000436122 256 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AL445687.1-201ENST00000439946 251 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 OSTCP8-201ENST00000445117 448 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.91□□□□□ -1.94
HNF4AP41235 RPL23AP20-201ENST00000447965 421 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 CECR9-201ENST00000453421 199 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.91□□□□□ -1.94
HNF4AP41235 AC004924.1-201ENST00000480160 781 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 RPS27AP10-201ENST00000496103 208 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AC098799.2-201ENST00000509466 868 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.91□□□□□ -1.94
HNF4AP41235 RNU6-314P-201ENST00000516574 104 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.91□□□□□ -1.94
HNF4AP41235 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.91□□□□□ -1.94
HNF4AP41235 MIR3117-201ENST00000584034 78 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.91□□□□□ -1.94
HNF4AP41235 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.91□□□□□ -1.94
HNF4AP41235 AL161798.1-201ENST00000604630 131 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AC092954.2-201ENST00000609103 430 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AC107294.1-201ENST00000609524 467 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.91□□□□□ -1.94
HNF4AP41235 LRRC77P-213ENST00000637727 880 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
HNF4AP41235 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HNF4AP41235 ELF2P3-201ENST00000445099 1506 ntBASIC2.91□□□□□ -1.94
HNF4AP41235 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
HNF4AP41235 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.91□□□□□ -1.94
HNF4AP41235 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.94
HNF4AP41235 AL137003.2-201ENST00000606924 2538 ntBASIC2.9□□□□□ -1.94
HNF4AP41235 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HNF4AP41235 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HNF4AP41235 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.9□□□□□ -1.95
HNF4AP41235 RNU1-73P-201ENST00000383971 164 ntBASIC2.9□□□□□ -1.95
HNF4AP41235 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms