Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC073343.1-201ENST00000328239 651 ntBASIC2.89□□□□□ -1.95
CDH3P22223 RNU6-74P-201ENST00000384235 107 ntBASIC2.89□□□□□ -1.95
CDH3P22223 MIR627-201ENST00000384979 97 ntBASIC2.89□□□□□ -1.95
CDH3P22223 GSTA9P-201ENST00000406231 611 ntBASIC2.89□□□□□ -1.95
CDH3P22223 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDH3P22223 RNA5SP274-201ENST00000410484 108 ntBASIC2.89□□□□□ -1.95
CDH3P22223 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDH3P22223 AL451074.3-201ENST00000437709 472 ntBASIC2.89□□□□□ -1.95
CDH3P22223 Z82210.1-201ENST00000440037 231 ntBASIC2.89□□□□□ -1.95
CDH3P22223 PIGFP3-201ENST00000441918 722 ntBASIC2.89□□□□□ -1.95
CDH3P22223 RPS12P18-201ENST00000442381 270 ntBASIC2.89□□□□□ -1.95
CDH3P22223 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH3P22223 KC877373.1-201ENST00000479066 408 ntBASIC2.89□□□□□ -1.95
CDH3P22223 RNU6-720P-201ENST00000516363 108 ntBASIC2.89□□□□□ -1.95
CDH3P22223 RNU6-826P-201ENST00000516827 104 ntBASIC2.89□□□□□ -1.95
CDH3P22223 RNA5SP471-201ENST00000516971 106 ntBASIC2.89□□□□□ -1.95
CDH3P22223 RNU6-410P-201ENST00000517006 107 ntBASIC2.89□□□□□ -1.95
CDH3P22223 OR5B19P-201ENST00000531766 928 ntBASIC2.89□□□□□ -1.95
CDH3P22223 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.89□□□□□ -1.95
CDH3P22223 AC034102.8-201ENST00000615146 484 ntBASIC2.89□□□□□ -1.95
CDH3P22223 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH3P22223 AL137790.1-201ENST00000634283 177 ntBASIC2.89□□□□□ -1.95
CDH3P22223 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH3P22223 OR5H6-203ENST00000642105 978 ntBASIC2.89□□□□□ -1.95
CDH3P22223 AL049641.1-201ENST00000441055 1948 ntBASIC2.89□□□□□ -1.95
CDH3P22223 TPTE2P4-201ENST00000258589 1605 ntBASIC2.89□□□□□ -1.95
CDH3P22223 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDH3P22223 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.88□□□□□ -1.95
CDH3P22223 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.88□□□□□ -1.95
CDH3P22223 Y_RNA.159-201ENST00000363674 87 ntBASIC2.88□□□□□ -1.95
CDH3P22223 Y_RNA.296-201ENST00000364930 108 ntBASIC2.88□□□□□ -1.95
CDH3P22223 Y_RNA.367-201ENST00000365544 101 ntBASIC2.88□□□□□ -1.95
CDH3P22223 RNU6-1103P-201ENST00000384150 107 ntBASIC2.88□□□□□ -1.95
CDH3P22223 MIR1-2-201ENST00000384961 85 ntBASIC2.88□□□□□ -1.95
CDH3P22223 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CDH3P22223 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.88□□□□□ -1.95
CDH3P22223 RNU2-39P-201ENST00000410604 198 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH3P22223 EEF1A1P41-201ENST00000414667 207 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AC114491.1-201ENST00000416095 246 ntBASIC2.88□□□□□ -1.95
CDH3P22223 BTF3L4P3-201ENST00000418879 476 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH3P22223 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH3P22223 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH3P22223 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH3P22223 AL512844.2-201ENST00000433990 593 ntBASIC2.88□□□□□ -1.95
CDH3P22223 MTATP6P16-201ENST00000434543 526 ntBASIC2.88□□□□□ -1.95
CDH3P22223 RPS20P5-201ENST00000434808 360 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH3P22223 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH3P22223 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH3P22223 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.88□□□□□ -1.95
CDH3P22223 AC117440.1-201ENST00000474107 571 ntBASIC2.88□□□□□ -1.95
CDH3P22223 RPL23AP11-201ENST00000475260 469 ntBASIC2.88□□□□□ -1.95
CDH3P22223 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH3P22223 RN7SL20P-201ENST00000488827 297 ntBASIC2.88□□□□□ -1.95
CDH3P22223 HMGB1P29-201ENST00000505659 499 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH3P22223 SCGB1D5P-201ENST00000515134 247 ntBASIC2.88□□□□□ -1.95
CDH3P22223 SNORA31.21-201ENST00000517180 77 ntBASIC2.88□□□□□ -1.95
CDH3P22223 RN7SKP40-201ENST00000517211 242 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH3P22223 AP001646.1-201ENST00000527936 915 ntBASIC2.88□□□□□ -1.95
CDH3P22223 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDH3P22223 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH3P22223 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH3P22223 SUB1P2-201ENST00000556401 297 ntBASIC2.88□□□□□ -1.95
CDH3P22223 EIF1P4-201ENST00000572664 335 ntBASIC2.88□□□□□ -1.95
CDH3P22223 LARP7P3-201ENST00000579888 337 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AC024619.4-201ENST00000580924 316 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AC098848.2-201ENST00000588023 330 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AL391646.1-201ENST00000603860 190 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AC084782.3-201ENST00000612282 578 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AL365204.3-201ENST00000612448 685 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AC007998.5-201ENST00000622938 237 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AC098679.4-201ENST00000624241 654 ntBASIC2.88□□□□□ -1.95
CDH3P22223 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
CDH3P22223 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH3P22223 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH3P22223 AC073325.2-201ENST00000339545 159 ntBASIC2.87□□□□□ -1.95
CDH3P22223 RNU6-1167P-201ENST00000363227 94 ntBASIC2.87□□□□□ -1.95
CDH3P22223 RNU6-1097P-201ENST00000363586 107 ntBASIC2.87□□□□□ -1.95
CDH3P22223 RNU6-641P-201ENST00000384006 107 ntBASIC2.87□□□□□ -1.95
CDH3P22223 RNU6-456P-201ENST00000384493 107 ntBASIC2.87□□□□□ -1.95
CDH3P22223 RNU6-817P-201ENST00000391083 104 ntBASIC2.87□□□□□ -1.95
CDH3P22223 U3.26-201ENST00000391236 204 ntBASIC2.87□□□□□ -1.95
CDH3P22223 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH3P22223 AC092809.3-201ENST00000415453 231 ntBASIC2.87□□□□□ -1.95
CDH3P22223 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH3P22223 AC092047.1-201ENST00000424997 240 ntBASIC2.87□□□□□ -1.95
CDH3P22223 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH3P22223 RPS24P13-201ENST00000442520 397 ntBASIC2.87□□□□□ -1.95
CDH3P22223 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH3P22223 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
CDH3P22223 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH3P22223 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH3P22223 RPPH1-2P-201ENST00000516688 293 ntBASIC2.87□□□□□ -1.95
CDH3P22223 FAM92A1P1-201ENST00000528023 890 ntBASIC2.87□□□□□ -1.95
CDH3P22223 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH3P22223 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms