Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 FGF7P2-201ENST00000332473 296 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
COL5A1P20908 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
COL5A1P20908 RNU6-462P-201ENST00000362659 105 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 Y_RNA.97-201ENST00000363094 102 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RNU6-289P-201ENST00000364093 107 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 SNORA7.2-201ENST00000364446 145 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RNU6-730P-201ENST00000383954 104 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 MIR613-201ENST00000385248 95 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 MIR1294-201ENST00000408503 142 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 PIGPP2-201ENST00000411569 458 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.79□□□□□ -2.12
COL5A1P20908 AL031779.1-201ENST00000415663 330 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.79□□□□□ -2.12
COL5A1P20908 CYCSP46-201ENST00000423569 204 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL5A1P20908 DLGAP5P1-201ENST00000430307 464 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.79□□□□□ -2.12
COL5A1P20908 EZH2P1-201ENST00000431167 291 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.79□□□□□ -2.12
COL5A1P20908 AL353706.1-201ENST00000436728 494 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RPS15AP7-201ENST00000439294 405 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RPS20P24-201ENST00000457473 361 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RPL21P104-201ENST00000464143 478 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RPS15AP17-201ENST00000470598 390 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 AC090453.1-201ENST00000495560 436 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.79□□□□□ -2.12
COL5A1P20908 AC010424.1-201ENST00000506336 297 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RPL37P25-201ENST00000507308 276 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RNU6-583P-201ENST00000516012 92 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RNU6-27P-201ENST00000516146 107 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RNA5SP468-201ENST00000516782 93 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RN7SKP234-201ENST00000517173 224 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RN7SKP40-201ENST00000517211 242 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 AP002963.1-201ENST00000530590 184 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.79□□□□□ -2.12
COL5A1P20908 AC092470.1-201ENST00000546187 132 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 RPS3AP23-202ENST00000574601 686 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 LARP7P2-201ENST00000575306 125 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.79□□□□□ -2.12
COL5A1P20908 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.79□□□□□ -2.12
COL5A1P20908 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL5A1P20908 AC073544.2-201ENST00000601155 540 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 HMGN2P28-201ENST00000606102 262 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
COL5A1P20908 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.79□□□□□ -2.12
COL5A1P20908 MIR4496-201ENST00000635896 61 ntBASIC1.79□□□□□ -2.12
COL5A1P20908 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL5A1P20908 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.79□□□□□ -2.12
COL5A1P20908 Y_RNA.41-201ENST00000362646 102 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
COL5A1P20908 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
COL5A1P20908 DSTNP4-201ENST00000399472 474 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AL356421.1-201ENST00000403255 413 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AL356473.1-201ENST00000406203 1408 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.78□□□□□ -2.12
COL5A1P20908 RPL17P12-201ENST00000413391 526 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 MTND3P17-201ENST00000416968 344 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AC009237.2-201ENST00000421358 284 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AL358453.1-201ENST00000422522 250 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.78□□□□□ -2.12
COL5A1P20908 PABPC1P9-201ENST00000426076 1612 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.78□□□□□ -2.12
COL5A1P20908 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.78□□□□□ -2.12
COL5A1P20908 AL365184.2-201ENST00000431139 435 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 RPS24P1-201ENST00000438550 371 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
COL5A1P20908 PAXBP1P1-201ENST00000449315 447 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 SSXP4-201ENST00000451349 245 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AC104073.1-201ENST00000451988 151 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AL033528.1-201ENST00000453780 140 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AC092757.1-201ENST00000467293 467 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AL121594.1-201ENST00000475906 575 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 MTAPP1-201ENST00000489154 819 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
COL5A1P20908 AC005178.1-201ENST00000508392 440 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 MTCYBP43-201ENST00000513621 740 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 MIR449C-201ENST00000516047 92 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 SNORA25.15-201ENST00000516487 89 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AP004247.1-201ENST00000531556 1289 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.78□□□□□ -2.12
COL5A1P20908 ACTR3BP3-201ENST00000565577 979 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AC136618.2-201ENST00000575091 400 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 MIR5089-201ENST00000580047 84 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.78□□□□□ -2.12
COL5A1P20908 MIR3199-1-201ENST00000582434 88 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 RSL24D1P11-201ENST00000591045 491 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AL139286.2-201ENST00000606838 396 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AC107214.2-201ENST00000608204 634 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 AC239868.4-201ENST00000608318 671 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.78□□□□□ -2.12
COL5A1P20908 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
COL5A1P20908 TEX21P-201ENST00000447107 1476 ntBASIC1.78□□□□□ -2.13
COL5A1P20908 MTND4P5-201ENST00000435821 1374 ntBASIC1.78□□□□□ -2.13
COL5A1P20908 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.77□□□□□ -2.13
COL5A1P20908 RNA5SP393-201ENST00000363423 117 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 RNA5SP391-201ENST00000363456 119 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.77□□□□□ -2.13
COL5A1P20908 RNU6-952P-201ENST00000391164 108 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 MIR1323-201ENST00000408090 73 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms