Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.85□□□□□ -1.63
LMNB1P20700 AC100770.1-201ENST00000532310 322 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.85□□□□□ -1.63
LMNB1P20700 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.85□□□□□ -1.63
LMNB1P20700 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LMNB1P20700 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.85□□□□□ -1.63
LMNB1P20700 BDH2P1-201ENST00000602288 736 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LMNB1P20700 AL162373.1-201ENST00000620433 407 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LMNB1P20700 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMNB1P20700 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LMNB1P20700 AC008725.1-201ENST00000605123 2263 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMNB1P20700 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMNB1P20700 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMNB1P20700 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LMNB1P20700 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMNB1P20700 Y_RNA.557-201ENST00000384680 107 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 SNORD73A-201ENST00000386062 65 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 RPL23AP48-201ENST00000406913 488 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.84□□□□□ -1.63
LMNB1P20700 AC008267.5-201ENST00000424928 265 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 HMGB1P9-201ENST00000429856 646 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.84□□□□□ -1.63
LMNB1P20700 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.84□□□□□ -1.63
LMNB1P20700 BTF3P15-201ENST00000455606 336 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.84□□□□□ -1.63
LMNB1P20700 RPL32P34-201ENST00000486380 400 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 AC022493.2-201ENST00000506122 481 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 MTCO2P24-201ENST00000515611 426 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.84□□□□□ -1.63
LMNB1P20700 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.84□□□□□ -1.63
LMNB1P20700 AC008269.2-201ENST00000561915 1105 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 MIR3149-201ENST00000584629 83 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 VN1R107P-201ENST00000601784 209 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 AC006006.1-201ENST00000603082 144 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 MIR432-201ENST00000606207 94 ntBASIC4.84□□□□□ -1.63
LMNB1P20700 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
LMNB1P20700 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LMNB1P20700 AC010733.2-201ENST00000589496 5702 ntBASIC4.84□□□□□ -1.64
LMNB1P20700 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMNB1P20700 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMNB1P20700 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.83□□□□□ -1.64
LMNB1P20700 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMNB1P20700 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMNB1P20700 Y_RNA.151-201ENST00000363566 112 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 Y_RNA.193-201ENST00000363979 102 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 RNU6-214P-201ENST00000384130 107 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 SNORA48.2-201ENST00000390926 124 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 Y_RNA.645-201ENST00000391229 102 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 RN7SKP167-201ENST00000411047 285 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.83□□□□□ -1.64
LMNB1P20700 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMNB1P20700 AL592045.1-201ENST00000429867 352 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.83□□□□□ -1.64
LMNB1P20700 RNU7-138P-201ENST00000459479 64 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 RPL37P6-201ENST00000460682 294 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 HSPE1P6-201ENST00000479457 291 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 HMGB1P30-201ENST00000492455 606 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 AC104576.1-201ENST00000524225 88 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.83□□□□□ -1.64
LMNB1P20700 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.83□□□□□ -1.64
LMNB1P20700 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.83□□□□□ -1.64
LMNB1P20700 MIR3124-201ENST00000582636 67 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 CDC27P3-201ENST00000635418 1910 ntBASIC4.83□□□□□ -1.64
LMNB1P20700 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMNB1P20700 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LMNB1P20700 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LMNB1P20700 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMNB1P20700 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMNB1P20700 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMNB1P20700 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMNB1P20700 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.82□□□□□ -1.64
LMNB1P20700 AL049781.1-201ENST00000623195 3585 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LMNB1P20700 SNORD35B-201ENST00000363660 87 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 RNU2-3P-201ENST00000410144 191 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 CYCSP33-201ENST00000414485 327 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 AC063979.1-201ENST00000415539 377 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.82□□□□□ -1.64
LMNB1P20700 TOMM22P1-201ENST00000418578 312 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 EIF4EP1-201ENST00000422311 642 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 MTCYBP10-201ENST00000424905 650 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 USMG5P1-201ENST00000425964 177 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.82□□□□□ -1.64
LMNB1P20700 AC133473.1-201ENST00000455173 299 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 RPL7P5-201ENST00000471472 736 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 AL049873.1-201ENST00000480540 376 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 AC087369.1-201ENST00000520775 996 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 MIR5187-201ENST00000583479 76 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.82□□□□□ -1.64
LMNB1P20700 RNU6-85P-201ENST00000605989 107 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 AC034102.8-201ENST00000615146 484 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 AL031601.2-202ENST00000622650 282 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.82□□□□□ -1.64
LMNB1P20700 Z99571.1-201ENST00000636677 394 ntBASIC4.82□□□□□ -1.64
LMNB1P20700 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.82□□□□□ -1.64
LMNB1P20700 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMNB1P20700 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms