Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.24□□□□□ -2.37
VCANP13611 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.24□□□□□ -2.37
VCANP13611 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.24□□□□□ -2.37
VCANP13611 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.24□□□□□ -2.37
VCANP13611 AC090666.1-201ENST00000578241 445 ntBASIC0.24□□□□□ -2.37
VCANP13611 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.24□□□□□ -2.37
VCANP13611 AC011155.1-201ENST00000316512 456 ntBASIC0.23□□□□□ -2.37
VCANP13611 Y_RNA.447-201ENST00000384184 113 ntBASIC0.23□□□□□ -2.37
VCANP13611 RNU4-78P-201ENST00000410940 126 ntBASIC0.23□□□□□ -2.37
VCANP13611 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.23□□□□□ -2.37
VCANP13611 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.23□□□□□ -2.37
VCANP13611 AP003049.1-201ENST00000529418 457 ntBASIC0.23□□□□□ -2.37
VCANP13611 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
VCANP13611 RPS3AP37-201ENST00000419176 745 ntBASIC0.23□□□□□ -2.37
VCANP13611 AC004383.1-201ENST00000438135 289 ntBASIC0.23□□□□□ -2.37
VCANP13611 AL135752.1-201ENST00000479477 471 ntBASIC0.23□□□□□ -2.37
VCANP13611 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.23□□□□□ -2.37
VCANP13611 MIR4287-201ENST00000579398 78 ntBASIC0.23□□□□□ -2.37
VCANP13611 PRR13P7-201ENST00000605538 430 ntBASIC0.23□□□□□ -2.37
VCANP13611 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.23□□□□□ -2.37
VCANP13611 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
VCANP13611 Y_RNA.203-201ENST00000364106 102 ntBASIC0.23□□□□□ -2.37
VCANP13611 Y_RNA.410-201ENST00000383992 113 ntBASIC0.23□□□□□ -2.37
VCANP13611 RPL23AP47-201ENST00000408017 460 ntBASIC0.23□□□□□ -2.37
VCANP13611 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.23□□□□□ -2.37
VCANP13611 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.23□□□□□ -2.37
VCANP13611 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
VCANP13611 AC007275.1-201ENST00000621243 671 ntBASIC0.23□□□□□ -2.37
VCANP13611 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.23□□□□□ -2.37
VCANP13611 XKRY2-202ENST00000623874 1581 ntBASIC0.23□□□□□ -2.37
VCANP13611 XKRY-202ENST00000624960 1581 ntBASIC0.23□□□□□ -2.37
VCANP13611 MTND4P34-201ENST00000572715 1371 ntBASIC0.22□□□□□ -2.37
VCANP13611 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
VCANP13611 RPL21P111-201ENST00000418453 477 ntBASIC0.22□□□□□ -2.37
VCANP13611 MTND4LP11-201ENST00000422184 280 ntBASIC0.22□□□□□ -2.37
VCANP13611 AC087884.1-201ENST00000469738 328 ntBASIC0.22□□□□□ -2.37
VCANP13611 RNU6-567P-201ENST00000516746 107 ntBASIC0.22□□□□□ -2.37
VCANP13611 RNU6-782P-201ENST00000516852 104 ntBASIC0.22□□□□□ -2.37
VCANP13611 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.22□□□□□ -2.37
VCANP13611 AC084824.5-201ENST00000612009 413 ntBASIC0.22□□□□□ -2.37
VCANP13611 RNU6-1064P-201ENST00000410626 104 ntBASIC0.22□□□□□ -2.37
VCANP13611 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.22□□□□□ -2.37
VCANP13611 AC243960.4-201ENST00000600532 288 ntBASIC0.22□□□□□ -2.37
VCANP13611 AC093788.1-201ENST00000609356 927 ntBASIC0.22□□□□□ -2.37
VCANP13611 MIR365A-201ENST00000362260 87 ntBASIC0.22□□□□□ -2.37
VCANP13611 Y_RNA.568-201ENST00000384742 113 ntBASIC0.22□□□□□ -2.37
VCANP13611 MIR100-201ENST00000385259 80 ntBASIC0.22□□□□□ -2.37
VCANP13611 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.22□□□□□ -2.37
VCANP13611 RPL37P21-201ENST00000435890 276 ntBASIC0.22□□□□□ -2.37
VCANP13611 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
VCANP13611 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.22□□□□□ -2.37
VCANP13611 AC084757.1-201ENST00000559987 490 ntBASIC0.22□□□□□ -2.37
VCANP13611 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.22□□□□□ -2.37
VCANP13611 AC245060.5-201ENST00000610778 3293 ntBASIC0.21□□□□□ -2.38
VCANP13611 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.21□□□□□ -2.38
VCANP13611 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.21□□□□□ -2.38
VCANP13611 RPL23AP3-201ENST00000453844 468 ntBASIC0.21□□□□□ -2.38
VCANP13611 SNORA76.2-201ENST00000517095 137 ntBASIC0.21□□□□□ -2.38
VCANP13611 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.21□□□□□ -2.38
VCANP13611 VN1R82P-201ENST00000601481 356 ntBASIC0.21□□□□□ -2.38
VCANP13611 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.21□□□□□ -2.38
VCANP13611 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.21□□□□□ -2.38
VCANP13611 MIR378F-201ENST00000578143 78 ntBASIC0.21□□□□□ -2.38
VCANP13611 AC109454.4-201ENST00000623411 649 ntBASIC0.21□□□□□ -2.38
VCANP13611 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
VCANP13611 AC096533.1-201ENST00000411645 353 ntBASIC0.2□□□□□ -2.38
VCANP13611 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.2□□□□□ -2.38
VCANP13611 AC018618.2-201ENST00000604770 446 ntBASIC0.2□□□□□ -2.38
VCANP13611 Y_RNA.52-201ENST00000362760 96 ntBASIC0.2□□□□□ -2.38
VCANP13611 AL034418.1-201ENST00000448675 860 ntBASIC0.2□□□□□ -2.38
VCANP13611 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.2□□□□□ -2.38
VCANP13611 AC016925.2-201ENST00000605108 242 ntBASIC0.2□□□□□ -2.38
VCANP13611 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
VCANP13611 RNY4P6-201ENST00000363667 96 ntBASIC0.2□□□□□ -2.38
VCANP13611 U8.7-201ENST00000364940 136 ntBASIC0.2□□□□□ -2.38
VCANP13611 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.2□□□□□ -2.38
VCANP13611 NF1P3-201ENST00000457709 450 ntBASIC0.2□□□□□ -2.38
VCANP13611 AL049830.1-201ENST00000468034 425 ntBASIC0.2□□□□□ -2.38
VCANP13611 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.2□□□□□ -2.38
VCANP13611 AL365204.3-201ENST00000612448 685 ntBASIC0.2□□□□□ -2.38
VCANP13611 RNA5SP105-201ENST00000391123 113 ntBASIC0.19□□□□□ -2.38
VCANP13611 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.19□□□□□ -2.38
VCANP13611 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
VCANP13611 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
VCANP13611 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.19□□□□□ -2.38
VCANP13611 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.19□□□□□ -2.38
VCANP13611 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.19□□□□□ -2.38
VCANP13611 AC009712.1-201ENST00000564938 316 ntBASIC0.19□□□□□ -2.38
VCANP13611 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
VCANP13611 MIR934-201ENST00000401241 83 ntBASIC0.19□□□□□ -2.38
VCANP13611 CCNG1P1-201ENST00000406783 885 ntBASIC0.19□□□□□ -2.38
VCANP13611 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.19□□□□□ -2.38
VCANP13611 RPL7P29-201ENST00000437151 728 ntBASIC0.19□□□□□ -2.38
VCANP13611 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.19□□□□□ -2.38
VCANP13611 AC079448.1-201ENST00000449377 373 ntBASIC0.19□□□□□ -2.38
VCANP13611 AC087477.1-201ENST00000465747 340 ntBASIC0.19□□□□□ -2.38
VCANP13611 RNU6-491P-201ENST00000516099 110 ntBASIC0.19□□□□□ -2.38
VCANP13611 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.19□□□□□ -2.38
VCANP13611 AC022202.1-201ENST00000613515 211 ntBASIC0.19□□□□□ -2.38
VCANP13611 GDI2P1-201ENST00000429312 1336 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms