Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL11A1P12107 AC021146.8-201ENST00000507455 733 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AL359273.1-201ENST00000510918 627 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL11A1P12107 RNU5A-4P-201ENST00000516588 111 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 RNU6-1261P-201ENST00000517194 104 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.58□□□□□ -2.16
COL11A1P12107 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL11A1P12107 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
COL11A1P12107 AC090502.2-201ENST00000549267 280 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.58□□□□□ -2.16
COL11A1P12107 FAM60BP-201ENST00000578364 658 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AC022662.1-201ENST00000580252 331 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AL360085.1-201ENST00000604713 532 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AC018638.7-201ENST00000605836 1114 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AC126118.1-201ENST00000607744 628 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AC007349.4-201ENST00000608114 532 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.58□□□□□ -2.16
COL11A1P12107 PART1_2.1-201ENST00000612397 250 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AC243773.3-201ENST00000613270 256 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.58□□□□□ -2.16
COL11A1P12107 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.58□□□□□ -2.16
COL11A1P12107 AC095038.3-201ENST00000634439 195 ntBASIC1.58□□□□□ -2.16
COL11A1P12107 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL11A1P12107 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.58□□□□□ -2.16
COL11A1P12107 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL11A1P12107 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL11A1P12107 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL11A1P12107 AC107982.1-201ENST00000507171 1300 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 RNU6-839P-201ENST00000363347 108 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 RNU4-92P-201ENST00000363783 136 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 Y_RNA.192-201ENST00000363977 102 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 Y_RNA.295-201ENST00000364918 102 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 SNORA6-201ENST00000384033 151 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 SNORA40.2-201ENST00000390847 128 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 ELOCP9-201ENST00000418624 239 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 BEND7P1-201ENST00000422058 457 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL11A1P12107 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.57□□□□□ -2.16
COL11A1P12107 RPL35AP22-201ENST00000436855 335 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.57□□□□□ -2.16
COL11A1P12107 AL606517.1-201ENST00000446914 387 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 PTENP1-201ENST00000447117 1215 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
COL11A1P12107 HMGN2P18-201ENST00000450680 270 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.57□□□□□ -2.16
COL11A1P12107 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 AC022493.1-201ENST00000492984 337 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 RN7SKP265-201ENST00000516448 223 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 AC023632.1-201ENST00000518463 375 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 HSPA8P13-201ENST00000523715 472 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.57□□□□□ -2.16
COL11A1P12107 MTCO2P15-201ENST00000532655 656 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 AC135279.1-201ENST00000543493 504 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 AC011604.1-201ENST00000545978 196 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.57□□□□□ -2.16
COL11A1P12107 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL11A1P12107 AC023824.2-201ENST00000566185 400 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 MIR5571-201ENST00000577998 113 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 AC012669.1-201ENST00000603209 283 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 MTND3P19-201ENST00000603825 345 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.57□□□□□ -2.16
COL11A1P12107 AC106754.1-201ENST00000562632 1513 ntBASIC1.57□□□□□ -2.16
COL11A1P12107 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
COL11A1P12107 RNU6-115P-201ENST00000364310 107 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 Y_RNA.354-201ENST00000365448 111 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 RNU6-198P-201ENST00000384258 104 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 SNORD65.1-201ENST00000390889 71 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 HIGD1AP15-201ENST00000416198 280 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.56□□□□□ -2.16
COL11A1P12107 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.56□□□□□ -2.16
COL11A1P12107 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.56□□□□□ -2.16
COL11A1P12107 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 AL445687.1-201ENST00000439946 251 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 AC097493.1-201ENST00000463958 372 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 AC093767.1-201ENST00000504523 156 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 CBX3P3-201ENST00000508108 532 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 AC113155.1-201ENST00000511141 769 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.56□□□□□ -2.16
COL11A1P12107 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.56□□□□□ -2.16
COL11A1P12107 AC090897.2-201ENST00000581715 130 ntBASIC1.56□□□□□ -2.16
COL11A1P12107 AC234772.3-201ENST00000602277 528 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms