Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 Y_RNA.255-201ENST00000364581 97 ntBASIC3.35□□□□□ -1.87
MMP3P08254 RNA5SP126-201ENST00000365092 109 ntBASIC3.35□□□□□ -1.87
MMP3P08254 MIR514A1-201ENST00000385133 98 ntBASIC3.35□□□□□ -1.87
MMP3P08254 MIR591-201ENST00000385290 95 ntBASIC3.35□□□□□ -1.87
MMP3P08254 SNORD37.1-201ENST00000390968 65 ntBASIC3.35□□□□□ -1.87
MMP3P08254 RNA5SP31-201ENST00000411144 127 ntBASIC3.35□□□□□ -1.87
MMP3P08254 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.35□□□□□ -1.87
MMP3P08254 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.35□□□□□ -1.87
MMP3P08254 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.35□□□□□ -1.87
MMP3P08254 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.35□□□□□ -1.87
MMP3P08254 RPS12P18-201ENST00000442381 270 ntBASIC3.35□□□□□ -1.87
MMP3P08254 DDX3P2-201ENST00000446138 111 ntBASIC3.35□□□□□ -1.87
MMP3P08254 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.35□□□□□ -1.87
MMP3P08254 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
MMP3P08254 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.35□□□□□ -1.87
MMP3P08254 RNU7-182P-201ENST00000459009 62 ntBASIC3.35□□□□□ -1.87
MMP3P08254 RNU6-261P-201ENST00000459506 102 ntBASIC3.35□□□□□ -1.87
MMP3P08254 RPS29P25-201ENST00000481709 171 ntBASIC3.35□□□□□ -1.87
MMP3P08254 EIF4EP3-201ENST00000498782 656 ntBASIC3.35□□□□□ -1.87
MMP3P08254 AC083906.5-201ENST00000503722 328 ntBASIC3.35□□□□□ -1.87
MMP3P08254 RNU6-123P-201ENST00000516163 102 ntBASIC3.35□□□□□ -1.87
MMP3P08254 RN7SKP60-201ENST00000516985 239 ntBASIC3.35□□□□□ -1.87
MMP3P08254 RNA5SP503-201ENST00000517047 117 ntBASIC3.35□□□□□ -1.87
MMP3P08254 SUB1P1-201ENST00000524415 382 ntBASIC3.35□□□□□ -1.87
MMP3P08254 AC011602.1-201ENST00000546484 331 ntBASIC3.35□□□□□ -1.87
MMP3P08254 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.35□□□□□ -1.87
MMP3P08254 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.35□□□□□ -1.87
MMP3P08254 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.35□□□□□ -1.87
MMP3P08254 RPL23AP84-201ENST00000571193 464 ntBASIC3.35□□□□□ -1.87
MMP3P08254 MIR5583-1-201ENST00000580941 59 ntBASIC3.35□□□□□ -1.87
MMP3P08254 AL158032.1-201ENST00000605401 106 ntBASIC3.35□□□□□ -1.87
MMP3P08254 AC107294.1-201ENST00000609524 467 ntBASIC3.35□□□□□ -1.87
MMP3P08254 AC130324.3-201ENST00000614165 542 ntBASIC3.35□□□□□ -1.87
MMP3P08254 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.35□□□□□ -1.87
MMP3P08254 AC099654.14-201ENST00000638599 341 ntBASIC3.35□□□□□ -1.87
MMP3P08254 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.35□□□□□ -1.87
MMP3P08254 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.35□□□□□ -1.87
MMP3P08254 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MMP3P08254 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
MMP3P08254 MIR449A-201ENST00000362113 91 ntBASIC3.34□□□□□ -1.87
MMP3P08254 SNORD115-7-201ENST00000365306 82 ntBASIC3.34□□□□□ -1.87
MMP3P08254 AP000567.1-201ENST00000406413 156 ntBASIC3.34□□□□□ -1.87
MMP3P08254 AL354719.1-201ENST00000406535 843 ntBASIC3.34□□□□□ -1.87
MMP3P08254 RPL30P2-201ENST00000414021 291 ntBASIC3.34□□□□□ -1.87
MMP3P08254 BTF3L4P3-201ENST00000418879 476 ntBASIC3.34□□□□□ -1.87
MMP3P08254 ZNF90P2-204ENST00000419323 1075 ntBASIC3.34□□□□□ -1.87
MMP3P08254 AL139413.1-201ENST00000421309 217 ntBASIC3.34□□□□□ -1.87
MMP3P08254 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.34□□□□□ -1.87
MMP3P08254 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.34□□□□□ -1.87
MMP3P08254 NEK4P1-201ENST00000433383 879 ntBASIC3.34□□□□□ -1.87
MMP3P08254 VDAC1P3-201ENST00000434069 851 ntBASIC3.34□□□□□ -1.87
MMP3P08254 BX679664.1-201ENST00000434429 253 ntBASIC3.34□□□□□ -1.87
MMP3P08254 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.34□□□□□ -1.87
MMP3P08254 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.34□□□□□ -1.87
MMP3P08254 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
MMP3P08254 GMFBP1-201ENST00000467831 427 ntBASIC3.34□□□□□ -1.87
MMP3P08254 AL163973.1-201ENST00000484753 577 ntBASIC3.34□□□□□ -1.87
MMP3P08254 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.34□□□□□ -1.87
MMP3P08254 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.34□□□□□ -1.87
MMP3P08254 RNA5SP367-201ENST00000516557 118 ntBASIC3.34□□□□□ -1.87
MMP3P08254 RN7SKP219-201ENST00000516825 296 ntBASIC3.34□□□□□ -1.87
MMP3P08254 AP005435.4-201ENST00000529514 284 ntBASIC3.34□□□□□ -1.87
MMP3P08254 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.34□□□□□ -1.87
MMP3P08254 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.34□□□□□ -1.87
MMP3P08254 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.34□□□□□ -1.87
MMP3P08254 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.34□□□□□ -1.87
MMP3P08254 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.34□□□□□ -1.87
MMP3P08254 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.34□□□□□ -1.87
MMP3P08254 AC011155.2-201ENST00000623202 216 ntBASIC3.34□□□□□ -1.87
MMP3P08254 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.87
MMP3P08254 U6.114-201ENST00000636407 96 ntBASIC3.34□□□□□ -1.87
MMP3P08254 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
MMP3P08254 API5P2-201ENST00000397055 1498 ntBASIC3.34□□□□□ -1.88
MMP3P08254 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
MMP3P08254 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
MMP3P08254 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.33□□□□□ -1.88
MMP3P08254 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MMP3P08254 RNA5SP295-201ENST00000362655 121 ntBASIC3.33□□□□□ -1.88
MMP3P08254 RNU6-552P-201ENST00000362869 119 ntBASIC3.33□□□□□ -1.88
MMP3P08254 Y_RNA.88-201ENST00000363029 99 ntBASIC3.33□□□□□ -1.88
MMP3P08254 RNU6-14P-201ENST00000384630 106 ntBASIC3.33□□□□□ -1.88
MMP3P08254 EI24P2-201ENST00000397776 1076 ntBASIC3.33□□□□□ -1.88
MMP3P08254 RN7SKP284-201ENST00000411002 343 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AC022028.1-201ENST00000412054 408 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.33□□□□□ -1.88
MMP3P08254 AL451054.2-201ENST00000420896 202 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.33□□□□□ -1.88
MMP3P08254 TXNP1-201ENST00000441872 371 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.33□□□□□ -1.88
MMP3P08254 MTND1P18-201ENST00000448191 573 ntBASIC3.33□□□□□ -1.88
MMP3P08254 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.33□□□□□ -1.88
MMP3P08254 RPL31P60-201ENST00000478450 367 ntBASIC3.33□□□□□ -1.88
MMP3P08254 RN7SL20P-201ENST00000488827 297 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AC104806.1-201ENST00000508720 308 ntBASIC3.33□□□□□ -1.88
MMP3P08254 HIGD1AP13-201ENST00000509878 289 ntBASIC3.33□□□□□ -1.88
MMP3P08254 AC074344.1-201ENST00000512823 224 ntBASIC3.33□□□□□ -1.88
MMP3P08254 RN7SKP132-201ENST00000516001 208 ntBASIC3.33□□□□□ -1.88
MMP3P08254 RNU1-143P-201ENST00000516296 146 ntBASIC3.33□□□□□ -1.88
MMP3P08254 SNORA31.8-201ENST00000516327 108 ntBASIC3.33□□□□□ -1.88
MMP3P08254 SNORA70.16-201ENST00000516390 95 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 239.9 ms