Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.26□□□□□ -2.37
APOBP04114 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.26□□□□□ -2.37
APOBP04114 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.26□□□□□ -2.37
APOBP04114 AC024060.1-201ENST00000607052 494 ntBASIC0.26□□□□□ -2.37
APOBP04114 DBF4P1-201ENST00000412976 1892 ntBASIC0.25□□□□□ -2.37
APOBP04114 SNORA8-201ENST00000384574 139 ntBASIC0.25□□□□□ -2.37
APOBP04114 SETP11-201ENST00000473027 690 ntBASIC0.25□□□□□ -2.37
APOBP04114 AC099513.1-201ENST00000490423 301 ntBASIC0.25□□□□□ -2.37
APOBP04114 HMGB1P38-201ENST00000490557 577 ntBASIC0.25□□□□□ -2.37
APOBP04114 MTCYBP16-201ENST00000509187 1129 ntBASIC0.25□□□□□ -2.37
APOBP04114 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.25□□□□□ -2.37
APOBP04114 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.25□□□□□ -2.37
APOBP04114 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.25□□□□□ -2.37
APOBP04114 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.25□□□□□ -2.37
APOBP04114 AL133384.1-201ENST00000412744 351 ntBASIC0.25□□□□□ -2.37
APOBP04114 AC073614.1-201ENST00000438690 650 ntBASIC0.25□□□□□ -2.37
APOBP04114 AL358794.1-201ENST00000445689 381 ntBASIC0.25□□□□□ -2.37
APOBP04114 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.25□□□□□ -2.37
APOBP04114 AC021146.2-201ENST00000504736 556 ntBASIC0.25□□□□□ -2.37
APOBP04114 RNU6-1073P-201ENST00000517182 106 ntBASIC0.25□□□□□ -2.37
APOBP04114 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.25□□□□□ -2.37
APOBP04114 MTND2P13-201ENST00000577438 1039 ntBASIC0.25□□□□□ -2.37
APOBP04114 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.25□□□□□ -2.37
APOBP04114 ELOCP5-201ENST00000604924 333 ntBASIC0.25□□□□□ -2.37
APOBP04114 SDAD1P2-201ENST00000441308 2028 ntBASIC0.25□□□□□ -2.37
APOBP04114 RNU6-1155P-201ENST00000363554 107 ntBASIC0.25□□□□□ -2.37
APOBP04114 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.25□□□□□ -2.37
APOBP04114 RPL39P29-201ENST00000447779 157 ntBASIC0.25□□□□□ -2.37
APOBP04114 SNRPGP17-201ENST00000603780 214 ntBASIC0.25□□□□□ -2.37
APOBP04114 AC135507.1-201ENST00000607214 561 ntBASIC0.25□□□□□ -2.37
APOBP04114 FAM157A-202ENST00000615155 405 ntBASIC0.25□□□□□ -2.37
APOBP04114 AC006001.4-201ENST00000622243 395 ntBASIC0.25□□□□□ -2.37
APOBP04114 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
APOBP04114 SNORD26-201ENST00000384147 75 ntBASIC0.25□□□□□ -2.37
APOBP04114 RNU6-185P-201ENST00000384421 107 ntBASIC0.25□□□□□ -2.37
APOBP04114 RPS25P9-201ENST00000435591 252 ntBASIC0.25□□□□□ -2.37
APOBP04114 AC098862.1-201ENST00000504991 413 ntBASIC0.25□□□□□ -2.37
APOBP04114 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
APOBP04114 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.25□□□□□ -2.37
APOBP04114 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.25□□□□□ -2.37
APOBP04114 MIR4661-201ENST00000582720 75 ntBASIC0.25□□□□□ -2.37
APOBP04114 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.25□□□□□ -2.37
APOBP04114 SNORD114-15-201ENST00000364687 72 ntBASIC0.24□□□□□ -2.37
APOBP04114 SNORA51.6-201ENST00000384151 125 ntBASIC0.24□□□□□ -2.37
APOBP04114 MIR214-201ENST00000385214 110 ntBASIC0.24□□□□□ -2.37
APOBP04114 AC087588.1-201ENST00000462203 316 ntBASIC0.24□□□□□ -2.37
APOBP04114 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.24□□□□□ -2.37
APOBP04114 CBX3P3-201ENST00000508108 532 ntBASIC0.24□□□□□ -2.37
APOBP04114 RNU7-193P-201ENST00000516723 65 ntBASIC0.24□□□□□ -2.37
APOBP04114 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.24□□□□□ -2.37
APOBP04114 AL355802.3-201ENST00000607571 545 ntBASIC0.24□□□□□ -2.37
APOBP04114 AC104763.3-201ENST00000613765 618 ntBASIC0.24□□□□□ -2.37
APOBP04114 AC020923.1-201ENST00000624021 917 ntBASIC0.24□□□□□ -2.37
APOBP04114 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
APOBP04114 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
APOBP04114 RPS3AP24-201ENST00000407896 734 ntBASIC0.24□□□□□ -2.37
APOBP04114 AL513343.1-201ENST00000451818 792 ntBASIC0.24□□□□□ -2.37
APOBP04114 AC090132.2-201ENST00000615881 347 ntBASIC0.24□□□□□ -2.37
APOBP04114 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
APOBP04114 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
APOBP04114 RNU4-7P-201ENST00000364758 141 ntBASIC0.24□□□□□ -2.37
APOBP04114 PTENP1-201ENST00000447117 1215 ntBASIC0.24□□□□□ -2.37
APOBP04114 AC015908.1-201ENST00000478739 476 ntBASIC0.24□□□□□ -2.37
APOBP04114 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.24□□□□□ -2.37
APOBP04114 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.24□□□□□ -2.37
APOBP04114 IGLVI-20-201ENST00000519296 130 ntBASIC0.24□□□□□ -2.37
APOBP04114 AC073569.3-201ENST00000619055 682 ntBASIC0.24□□□□□ -2.37
APOBP04114 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
APOBP04114 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.23□□□□□ -2.37
APOBP04114 AC006461.1-201ENST00000412637 326 ntBASIC0.23□□□□□ -2.37
APOBP04114 MTCYBP34-201ENST00000439552 670 ntBASIC0.23□□□□□ -2.37
APOBP04114 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.23□□□□□ -2.37
APOBP04114 AC136628.3-201ENST00000521868 290 ntBASIC0.23□□□□□ -2.37
APOBP04114 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.23□□□□□ -2.37
APOBP04114 AC010186.2-204ENST00000537668 439 ntBASIC0.23□□□□□ -2.37
APOBP04114 AC025588.4-201ENST00000615802 908 ntBASIC0.23□□□□□ -2.37
APOBP04114 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.23□□□□□ -2.37
APOBP04114 U8.7-201ENST00000364940 136 ntBASIC0.23□□□□□ -2.37
APOBP04114 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
APOBP04114 Y_RNA.571-201ENST00000384753 98 ntBASIC0.23□□□□□ -2.37
APOBP04114 MIR92A1-201ENST00000385233 78 ntBASIC0.23□□□□□ -2.37
APOBP04114 RNA5SP105-201ENST00000391123 113 ntBASIC0.23□□□□□ -2.37
APOBP04114 AC092393.1-201ENST00000439625 742 ntBASIC0.23□□□□□ -2.37
APOBP04114 ANKRD26P4-201ENST00000455755 950 ntBASIC0.23□□□□□ -2.37
APOBP04114 OR52A4P-202ENST00000481634 799 ntBASIC0.23□□□□□ -2.37
APOBP04114 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.23□□□□□ -2.37
APOBP04114 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
APOBP04114 AC108120.2-201ENST00000512973 294 ntBASIC0.23□□□□□ -2.37
APOBP04114 AC025857.1-201ENST00000525252 377 ntBASIC0.23□□□□□ -2.37
APOBP04114 AC118273.2-201ENST00000532092 465 ntBASIC0.23□□□□□ -2.37
APOBP04114 AC017083.3-201ENST00000609955 700 ntBASIC0.23□□□□□ -2.37
APOBP04114 AP006248.3-201ENST00000623580 594 ntBASIC0.23□□□□□ -2.37
APOBP04114 RNA5SP240-201ENST00000365355 128 ntBASIC0.23□□□□□ -2.37
APOBP04114 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.23□□□□□ -2.37
APOBP04114 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.23□□□□□ -2.37
APOBP04114 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.23□□□□□ -2.37
APOBP04114 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.23□□□□□ -2.37
APOBP04114 HMGB1P14-201ENST00000557424 591 ntBASIC0.23□□□□□ -2.37
APOBP04114 MTCO2P22-201ENST00000603246 681 ntBASIC0.23□□□□□ -2.37
APOBP04114 MIR7515-201ENST00000637837 67 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms