Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.58□□□□□ -2.32
SPTA1P02549 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.58□□□□□ -2.32
SPTA1P02549 CR381572.1-201ENST00000625098 102 ntBASIC0.58□□□□□ -2.32
SPTA1P02549 SNORA9.1-201ENST00000362412 131 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 SNORA3A-201ENST00000364113 130 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 SNORD26-201ENST00000384147 75 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SPTA1P02549 snoU13.28-201ENST00000459235 104 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 RPL31P60-201ENST00000478450 367 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.57□□□□□ -2.32
SPTA1P02549 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SPTA1P02549 RNU6-928P-201ENST00000516876 104 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
SPTA1P02549 OR5B19P-201ENST00000531766 928 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 AL627230.6-201ENST00000611129 280 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.57□□□□□ -2.32
SPTA1P02549 RNU6-920P-201ENST00000410926 92 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.57□□□□□ -2.32
SPTA1P02549 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.57□□□□□ -2.32
SPTA1P02549 MIR4529-201ENST00000578110 78 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 AC079395.3-201ENST00000615161 484 ntBASIC0.57□□□□□ -2.32
SPTA1P02549 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SPTA1P02549 RNU6-48P-201ENST00000384161 107 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 RNU6-39P-201ENST00000384344 107 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 Z82190.1-201ENST00000454534 490 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 OR8K4P-201ENST00000534608 872 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 CYP4A27P-201ENST00000567218 190 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 MIR6718-201ENST00000616153 80 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 AC109454.4-201ENST00000623411 649 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.56□□□□□ -2.32
SPTA1P02549 MIR676-201ENST00000390702 67 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 RNU6-244P-201ENST00000391028 104 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 RPS3AP24-201ENST00000407896 734 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 AL022718.1-201ENST00000412004 84 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.56□□□□□ -2.32
SPTA1P02549 AL161449.1-201ENST00000414531 1199 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 EDDM3CP-201ENST00000415977 425 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.56□□□□□ -2.32
SPTA1P02549 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.56□□□□□ -2.32
SPTA1P02549 SNRPGP12-201ENST00000449481 213 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.56□□□□□ -2.32
SPTA1P02549 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 AP005639.2-201ENST00000527592 928 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 EIF4EP5-201ENST00000528228 640 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 MIR4287-201ENST00000579398 78 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 AC055876.5-201ENST00000605667 259 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 AC087045.1-201ENST00000605856 382 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 AL773524.1-201ENST00000614065 229 ntBASIC0.56□□□□□ -2.32
SPTA1P02549 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.56□□□□□ -2.32
SPTA1P02549 RNA5SP450-201ENST00000411206 102 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 RPS15AP40-201ENST00000419621 391 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.55□□□□□ -2.32
SPTA1P02549 AC098614.2-201ENST00000426040 255 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 AL161788.1-201ENST00000441805 169 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 RNU6-420P-201ENST00000458780 107 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 AC027575.1-201ENST00000481064 460 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.55□□□□□ -2.32
SPTA1P02549 AC108120.2-201ENST00000512973 294 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 RNU6-1308P-201ENST00000516817 103 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 MIR3609-201ENST00000582661 80 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 U3.13-201ENST00000364804 214 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 Y_RNA.457-201ENST00000384237 111 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 MIR147B-201ENST00000390185 80 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 AL512604.1-201ENST00000404812 257 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 MTCO3P12-201ENST00000416718 547 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 VN1R42P-201ENST00000424651 344 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 MICF-203ENST00000432679 129 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 MTCYBP34-201ENST00000439552 670 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 MTND5P14-201ENST00000441481 1267 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.55□□□□□ -2.32
SPTA1P02549 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.55□□□□□ -2.32
SPTA1P02549 MIR3616-201ENST00000584070 92 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 SNORD14A-201ENST00000606526 91 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.55□□□□□ -2.32
SPTA1P02549 AC240442.1-201ENST00000616055 283 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.55□□□□□ -2.32
SPTA1P02549 SNORA38-201ENST00000363946 132 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.54□□□□□ -2.32
SPTA1P02549 RPL36P19-201ENST00000430744 301 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.54□□□□□ -2.32
SPTA1P02549 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.54□□□□□ -2.32
SPTA1P02549 AC005908.1-201ENST00000468701 347 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 RNU6-362P-201ENST00000516736 90 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.54□□□□□ -2.32
SPTA1P02549 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.54□□□□□ -2.32
SPTA1P02549 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.54□□□□□ -2.32
SPTA1P02549 AL450336.1-201ENST00000605180 586 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 AC018638.7-201ENST00000605836 1114 ntBASIC0.54□□□□□ -2.32
SPTA1P02549 AC135507.1-201ENST00000607214 561 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms