Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
CLPTM1O96005 AL161431.1-201ENST00000618966 4205 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CLPTM1O96005 AC073343.1-201ENST00000328239 651 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 Y_RNA.89-201ENST00000363031 102 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 SNORD46.1-201ENST00000364139 104 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 RNA5SP72-201ENST00000364442 117 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 RNU6-534P-201ENST00000364877 106 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 Y_RNA.295-201ENST00000364918 102 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 RNU4-48P-201ENST00000365559 182 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 RNU6-946P-201ENST00000383878 107 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 RN7SKP111-201ENST00000410349 271 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.89□□□□□ -1.95
CLPTM1O96005 HMGN2P30-201ENST00000423237 256 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 GTF2IP20-201ENST00000431663 360 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC005019.1-201ENST00000436455 431 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.89□□□□□ -1.95
CLPTM1O96005 AC016691.1-201ENST00000441321 413 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLPTM1O96005 AC020550.1-201ENST00000447385 163 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AL162395.1-201ENST00000457882 422 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC008571.1-201ENST00000467232 300 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC083798.1-201ENST00000472671 131 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.89□□□□□ -1.95
CLPTM1O96005 RPL30P14-201ENST00000482744 348 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 RPL36AP51-201ENST00000487216 318 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 MTAPP1-201ENST00000489154 819 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC117522.1-201ENST00000509821 380 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 SNORA40.12-201ENST00000516329 111 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 RNU6-826P-201ENST00000516827 104 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC134698.4-201ENST00000523451 826 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AP006587.4-201ENST00000526053 529 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.89□□□□□ -1.95
CLPTM1O96005 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.89□□□□□ -1.95
CLPTM1O96005 OR5B19P-201ENST00000531766 928 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.89□□□□□ -1.95
CLPTM1O96005 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.89□□□□□ -1.95
CLPTM1O96005 AC093536.2-201ENST00000565257 1406 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.89□□□□□ -1.95
CLPTM1O96005 RPL23AP78-201ENST00000599928 470 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.89□□□□□ -1.95
CLPTM1O96005 AL670379.6-201ENST00000603753 252 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AL670379.11-201ENST00000604059 253 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 NUTF2P8-201ENST00000604593 363 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC008162.1-201ENST00000604718 254 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AL670379.1-201ENST00000604752 252 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC012468.1-201ENST00000604888 430 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC106900.2-201ENST00000604994 317 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AL670379.5-201ENST00000605253 252 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AL670379.12-201ENST00000605291 253 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AL670379.8-201ENST00000605353 252 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AL670379.7-201ENST00000605823 252 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AL138880.2-201ENST00000616214 239 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 FRG1KP-201ENST00000623592 341 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 AC005609.4-201ENST00000625071 447 ntBASIC2.89□□□□□ -1.95
CLPTM1O96005 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.89□□□□□ -1.95
CLPTM1O96005 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLPTM1O96005 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLPTM1O96005 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.89□□□□□ -1.95
CLPTM1O96005 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLPTM1O96005 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CLPTM1O96005 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.88□□□□□ -1.95
CLPTM1O96005 RNU6-179P-201ENST00000363350 107 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 RNU1-109P-201ENST00000383960 147 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 Y_RNA.481-201ENST00000384373 102 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 RNU6-606P-201ENST00000384721 111 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 MIR34B-201ENST00000385076 84 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 MIR514A1-201ENST00000385133 98 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 MIR23A-201ENST00000385245 73 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 MIR454-201ENST00000390180 115 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 FO393413.1-201ENST00000402892 195 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 FAT1P1-201ENST00000406588 507 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 RN7SKP140-201ENST00000411196 284 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 USP9YP6-201ENST00000413550 854 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.88□□□□□ -1.95
CLPTM1O96005 MTCYBP8-201ENST00000422855 651 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.88□□□□□ -1.95
CLPTM1O96005 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.88□□□□□ -1.95
CLPTM1O96005 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.88□□□□□ -1.95
CLPTM1O96005 AC098799.2-201ENST00000509466 868 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 AC108078.2-201ENST00000510750 236 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.88□□□□□ -1.95
CLPTM1O96005 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.88□□□□□ -1.95
CLPTM1O96005 SNORA31.8-201ENST00000516327 108 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 RNU6-835P-201ENST00000516974 104 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 ELOCP31-201ENST00000540463 467 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.88□□□□□ -1.95
CLPTM1O96005 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.88□□□□□ -1.95
CLPTM1O96005 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.88□□□□□ -1.95
CLPTM1O96005 MIR4276-201ENST00000584832 70 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 AL162413.1-201ENST00000603198 110 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CLPTM1O96005 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 AL354950.2-201ENST00000617939 290 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 AC025034.2-201ENST00000623264 286 ntBASIC2.88□□□□□ -1.95
CLPTM1O96005 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.88□□□□□ -1.95
CLPTM1O96005 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CLPTM1O96005 GABRG2-229ENST00000641017 3628 ntBASIC2.87□□□□□ -1.95
CLPTM1O96005 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms