Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC090617.10-201ENST00000624308 134 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 AP003400.5-201ENST00000624827 617 ntBASIC3.04□□□□□ -1.92
ZIC3O60481 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZIC3O60481 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZIC3O60481 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.04□□□□□ -1.92
ZIC3O60481 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZIC3O60481 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZIC3O60481 AC002546.1-201ENST00000588041 2504 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZIC3O60481 Z83843.1-201ENST00000604070 3685 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.03□□□□□ -1.92
ZIC3O60481 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZIC3O60481 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
ZIC3O60481 RNU6-82P-201ENST00000363970 107 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 RNU5E-4P-201ENST00000364931 120 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 RNU6-393P-201ENST00000384475 107 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 SNORD70.1-201ENST00000391007 85 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.03□□□□□ -1.92
ZIC3O60481 AL162578.1-201ENST00000406202 378 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 RNU6-1148P-201ENST00000410992 104 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.03□□□□□ -1.92
ZIC3O60481 ARL5AP1-201ENST00000418991 388 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AC006946.1-201ENST00000429106 328 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 RPL23AP69-201ENST00000431134 458 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AL512844.2-201ENST00000433990 593 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.03□□□□□ -1.92
ZIC3O60481 CECR9-201ENST00000453421 199 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.03□□□□□ -1.92
ZIC3O60481 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.03□□□□□ -1.92
ZIC3O60481 AL136097.1-201ENST00000456945 913 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 PMCHL2-203ENST00000457791 237 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 RNU6-1208P-201ENST00000459588 107 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 RPS15AP34-201ENST00000487776 387 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.03□□□□□ -1.92
ZIC3O60481 AC010486.1-201ENST00000511793 424 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AC104136.1-201ENST00000512969 394 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 Y_RNA.665-201ENST00000516177 98 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 RNU6-143P-201ENST00000516942 93 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 RNU6-1315P-201ENST00000517187 99 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AP003122.3-201ENST00000526316 255 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AC084851.1-201ENST00000529105 249 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.03□□□□□ -1.92
ZIC3O60481 AC005476.1-201ENST00000554427 397 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ZIC3O60481 MIR1273C-201ENST00000578669 77 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 MIR4276-201ENST00000584832 70 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.03□□□□□ -1.92
ZIC3O60481 AC007179.3-201ENST00000604976 235 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AC092807.2-201ENST00000609367 243 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 MIR8058-201ENST00000615737 89 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 AC027309.3-201ENST00000623419 351 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.03□□□□□ -1.92
ZIC3O60481 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.03□□□□□ -1.92
ZIC3O60481 AC118273.1-201ENST00000525324 3006 ntBASIC3.03□□□□□ -1.92
ZIC3O60481 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
ZIC3O60481 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
ZIC3O60481 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZIC3O60481 AL359693.1-201ENST00000614959 2407 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZIC3O60481 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
ZIC3O60481 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.02□□□□□ -1.93
ZIC3O60481 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.02□□□□□ -1.93
ZIC3O60481 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.02□□□□□ -1.93
ZIC3O60481 AC091152.2-201ENST00000591628 2569 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 SNORA70.4-201ENST00000365509 134 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 Y_RNA.399-201ENST00000383955 105 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 MIR578-201ENST00000384828 96 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 MIR301A-201ENST00000385261 86 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 RNU4-26P-201ENST00000410270 107 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 RNA5SP120-201ENST00000410900 112 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AC126124.2-201ENST00000413542 321 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AC063979.1-201ENST00000415539 377 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.02□□□□□ -1.93
ZIC3O60481 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.02□□□□□ -1.93
ZIC3O60481 AC005326.1-201ENST00000429197 123 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 NEK4P1-201ENST00000433383 879 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.02□□□□□ -1.93
ZIC3O60481 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.02□□□□□ -1.93
ZIC3O60481 AL360271.2-201ENST00000447710 161 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AL590639.1-201ENST00000456484 337 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 snoU13.22-201ENST00000459428 104 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AC004801.2-202ENST00000463559 283 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 RPL23AP67-201ENST00000465341 474 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 RPL32P34-201ENST00000486380 400 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 Y_RNA.654-201ENST00000497848 106 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 HMGN1P12-201ENST00000499125 195 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AC114786.4-201ENST00000508771 728 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AC098799.2-201ENST00000509466 868 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 RNU2-69P-201ENST00000516061 100 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 Y_RNA.702-201ENST00000516843 96 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.02□□□□□ -1.93
ZIC3O60481 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.02□□□□□ -1.93
ZIC3O60481 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.02□□□□□ -1.93
ZIC3O60481 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.02□□□□□ -1.93
ZIC3O60481 AL162713.1-201ENST00000604480 262 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AC022306.2-201ENST00000617563 647 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 XIST_intron.1-201ENST00000619444 68 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 AL136221.1-201ENST00000621449 509 ntBASIC3.02□□□□□ -1.93
ZIC3O60481 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms