Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC079610.2-201ENST00000604818 690 ntBASIC0.74□□□□□ -2.29
SSSCA1O60232 AC116312.1-201ENST00000606841 314 ntBASIC0.74□□□□□ -2.29
SSSCA1O60232 MIR6078-201ENST00000611069 100 ntBASIC0.74□□□□□ -2.29
SSSCA1O60232 DUSP12P1-201ENST00000612874 516 ntBASIC0.74□□□□□ -2.29
SSSCA1O60232 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
SSSCA1O60232 AP003485.1-201ENST00000625093 753 ntBASIC0.74□□□□□ -2.29
SSSCA1O60232 MIR3199-2-201ENST00000636243 86 ntBASIC0.74□□□□□ -2.29
SSSCA1O60232 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
SSSCA1O60232 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.74□□□□□ -2.29
SSSCA1O60232 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SSSCA1O60232 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.74□□□□□ -2.29
SSSCA1O60232 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SSSCA1O60232 RNU6-152P-201ENST00000384037 107 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
SSSCA1O60232 SNORA17.3-201ENST00000391159 129 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 RNA5SP501-201ENST00000410990 112 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.73□□□□□ -2.29
SSSCA1O60232 FCF1P6-201ENST00000456841 595 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 AP001324.2-201ENST00000461163 319 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.73□□□□□ -2.29
SSSCA1O60232 SNORA25.11-201ENST00000515935 105 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 AP005660.1-201ENST00000522972 293 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 AC125611.1-201ENST00000549563 229 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 AC090115.3-201ENST00000553218 849 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.73□□□□□ -2.29
SSSCA1O60232 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.73□□□□□ -2.29
SSSCA1O60232 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SSSCA1O60232 MIR8074-201ENST00000615081 81 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 U1.36-201ENST00000620684 176 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SSSCA1O60232 RBBP8P1-201ENST00000449447 1844 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 ZNF680P1-201ENST00000436625 1469 ntBASIC0.73□□□□□ -2.29
SSSCA1O60232 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.72□□□□□ -2.29
SSSCA1O60232 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
SSSCA1O60232 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SSSCA1O60232 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SSSCA1O60232 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 AL591034.2-201ENST00000402839 359 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.72□□□□□ -2.29
SSSCA1O60232 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.72□□□□□ -2.29
SSSCA1O60232 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.72□□□□□ -2.29
SSSCA1O60232 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.72□□□□□ -2.29
SSSCA1O60232 MTCO3P2-201ENST00000457365 171 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 snoU13.9-201ENST00000458927 103 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 snoU13.26-201ENST00000459452 105 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 RPS15AP17-201ENST00000470598 390 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.72□□□□□ -2.29
SSSCA1O60232 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.72□□□□□ -2.29
SSSCA1O60232 RNA5SP291-201ENST00000517222 105 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.72□□□□□ -2.29
SSSCA1O60232 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.72□□□□□ -2.29
SSSCA1O60232 AP003122.4-201ENST00000530980 758 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.72□□□□□ -2.29
SSSCA1O60232 NDUFA5P6-201ENST00000542110 379 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.72□□□□□ -2.29
SSSCA1O60232 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.72□□□□□ -2.29
SSSCA1O60232 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.72□□□□□ -2.29
SSSCA1O60232 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.72□□□□□ -2.29
SSSCA1O60232 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.72□□□□□ -2.29
SSSCA1O60232 AL158827.2-201ENST00000602494 330 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 SNRPGP17-201ENST00000603780 214 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 AC136601.2-201ENST00000604356 474 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SSSCA1O60232 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 AL691447.3-201ENST00000635020 330 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 AL590396.2-201ENST00000636511 1041 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 AC009950.2-201ENST00000636548 183 ntBASIC0.72□□□□□ -2.29
SSSCA1O60232 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SSSCA1O60232 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SSSCA1O60232 RNU6-271P-201ENST00000363858 105 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 MIR597-201ENST00000384968 97 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 MIR95-201ENST00000385072 81 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SSSCA1O60232 AC078974.1-201ENST00000411597 223 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.71□□□□□ -2.3
SSSCA1O60232 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.71□□□□□ -2.3
SSSCA1O60232 C1DP1-201ENST00000426049 402 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.71□□□□□ -2.3
SSSCA1O60232 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.71□□□□□ -2.3
SSSCA1O60232 AC006512.1-201ENST00000468816 291 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.71□□□□□ -2.3
SSSCA1O60232 SNORA48.11-201ENST00000517015 89 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.71□□□□□ -2.3
SSSCA1O60232 AC087441.2-201ENST00000529141 262 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 OR5B19P-201ENST00000531766 928 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 BNIP3P19-201ENST00000605397 577 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 AC004492.1-201ENST00000607036 742 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 AL359314.1-201ENST00000616913 261 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 AC241585.2-209ENST00000638217 143 ntBASIC0.71□□□□□ -2.3
SSSCA1O60232 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SSSCA1O60232 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.7□□□□□ -2.3
SSSCA1O60232 GDI2P1-201ENST00000429312 1336 ntBASIC0.7□□□□□ -2.3
SSSCA1O60232 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SSSCA1O60232 Z75746.1-201ENST00000440243 2080 ntBASIC0.7□□□□□ -2.3
SSSCA1O60232 RNU11-3P-201ENST00000391111 133 ntBASIC0.7□□□□□ -2.3
SSSCA1O60232 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.7□□□□□ -2.3
SSSCA1O60232 TOMM20P4-201ENST00000427861 435 ntBASIC0.7□□□□□ -2.3
SSSCA1O60232 ZYG11AP1-201ENST00000430329 837 ntBASIC0.7□□□□□ -2.3
SSSCA1O60232 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms