Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.43□□□□□ -2.18
SSNA1O43805 AC025750.2-201ENST00000442609 450 ntBASIC1.43□□□□□ -2.18
SSNA1O43805 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.43□□□□□ -2.18
SSNA1O43805 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.43□□□□□ -2.18
SSNA1O43805 FAM133DP-201ENST00000464802 691 ntBASIC1.43□□□□□ -2.18
SSNA1O43805 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.43□□□□□ -2.18
SSNA1O43805 AC107393.1-201ENST00000512403 346 ntBASIC1.43□□□□□ -2.18
SSNA1O43805 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.43□□□□□ -2.18
SSNA1O43805 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.43□□□□□ -2.18
SSNA1O43805 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.43□□□□□ -2.18
SSNA1O43805 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.43□□□□□ -2.18
SSNA1O43805 AL133153.1-201ENST00000557756 303 ntBASIC1.43□□□□□ -2.18
SSNA1O43805 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.43□□□□□ -2.18
SSNA1O43805 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.43□□□□□ -2.18
SSNA1O43805 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.43□□□□□ -2.18
SSNA1O43805 AL160281.1-201ENST00000605307 311 ntBASIC1.43□□□□□ -2.18
SSNA1O43805 AC013470.4-201ENST00000619978 986 ntBASIC1.43□□□□□ -2.18
SSNA1O43805 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.43□□□□□ -2.18
SSNA1O43805 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.43□□□□□ -2.18
SSNA1O43805 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SSNA1O43805 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.43□□□□□ -2.18
SSNA1O43805 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SSNA1O43805 AL356292.1-201ENST00000283110 373 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 RNU1-57P-201ENST00000384491 166 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 AL079342.1-201ENST00000401460 267 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.42□□□□□ -2.18
SSNA1O43805 AC104651.1-201ENST00000427559 735 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 AL445646.1-201ENST00000431784 216 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 HMGN2P3-201ENST00000433603 273 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 HMGN2P5-201ENST00000436882 273 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.42□□□□□ -2.18
SSNA1O43805 RNA5SP57-201ENST00000459463 123 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.42□□□□□ -2.18
SSNA1O43805 AC104685.1-201ENST00000502445 371 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.42□□□□□ -2.18
SSNA1O43805 AC021146.2-201ENST00000504736 556 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 RNU6-667P-201ENST00000517186 102 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 DEFB130C-202ENST00000530001 230 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
SSNA1O43805 AC060771.1-201ENST00000582031 164 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.42□□□□□ -2.18
SSNA1O43805 AC068944.2-201ENST00000610373 403 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.42□□□□□ -2.18
SSNA1O43805 AC108479.2-201ENST00000617314 601 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC1.42□□□□□ -2.18
SSNA1O43805 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC1.42□□□□□ -2.18
SSNA1O43805 AC006927.2-201ENST00000639256 389 ntBASIC1.42□□□□□ -2.18
SSNA1O43805 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
SSNA1O43805 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SSNA1O43805 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.41□□□□□ -2.18
SSNA1O43805 RNU6-289P-201ENST00000364093 107 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 SNORA70.4-201ENST00000365509 134 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
SSNA1O43805 SNORA67.3-201ENST00000384366 140 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 AL359634.1-202ENST00000404721 284 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 BX510359.4-201ENST00000423750 193 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.41□□□□□ -2.18
SSNA1O43805 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.41□□□□□ -2.18
SSNA1O43805 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
SSNA1O43805 HMGN1P5-201ENST00000448591 263 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.41□□□□□ -2.18
SSNA1O43805 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.41□□□□□ -2.18
SSNA1O43805 AC117522.2-201ENST00000510049 657 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.41□□□□□ -2.18
SSNA1O43805 AC021451.1-201ENST00000523498 1129 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 DEFB131D-201ENST00000526803 184 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.41□□□□□ -2.18
SSNA1O43805 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.41□□□□□ -2.18
SSNA1O43805 AC016925.2-201ENST00000605108 242 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 AC087045.1-201ENST00000605856 382 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 MIR7106-201ENST00000612419 65 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 AL359314.1-201ENST00000616913 261 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.41□□□□□ -2.18
SSNA1O43805 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.41□□□□□ -2.18
SSNA1O43805 AC097655.1-201ENST00000635075 318 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 AC099654.9-201ENST00000637055 678 ntBASIC1.41□□□□□ -2.18
SSNA1O43805 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SSNA1O43805 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.19
SSNA1O43805 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.4□□□□□ -2.19
SSNA1O43805 AP000648.3-201ENST00000623539 4507 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 GNG5P1-201ENST00000255500 204 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 snoZ40.1-201ENST00000364540 72 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 RNU6-898P-201ENST00000365627 104 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 SNORA64-201ENST00000384674 134 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.4□□□□□ -2.19
SSNA1O43805 EIF4EP2-201ENST00000422816 654 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.4□□□□□ -2.19
SSNA1O43805 AL645568.3-201ENST00000433683 316 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.4□□□□□ -2.19
SSNA1O43805 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.4□□□□□ -2.19
SSNA1O43805 ELOCP30-201ENST00000447108 299 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 RPL7P43-201ENST00000478876 753 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 AC023194.1-201ENST00000493084 308 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.4□□□□□ -2.19
SSNA1O43805 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.4□□□□□ -2.19
SSNA1O43805 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
SSNA1O43805 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.4□□□□□ -2.19
SSNA1O43805 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.4□□□□□ -2.19
SSNA1O43805 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms