Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.6□□□□□ -1.83
PHGDHO43175 AC007389.2-201ENST00000434630 306 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 BRK1P2-201ENST00000442875 223 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 AL078601.1-201ENST00000444542 271 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 NUTF2P7-201ENST00000453086 375 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 RPL21P13-201ENST00000488305 481 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.6□□□□□ -1.83
PHGDHO43175 AC079140.5-201ENST00000507882 310 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 RNU1-86P-201ENST00000516108 154 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 RNU1-103P-201ENST00000516502 125 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 RNU1-107P-201ENST00000516617 154 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 RNU7-30P-201ENST00000516835 62 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 CYCSP27-201ENST00000527643 293 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 MIR4425-201ENST00000580572 84 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.6□□□□□ -1.83
PHGDHO43175 AC005498.1-201ENST00000592125 465 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHGDHO43175 AC006111.3-201ENST00000622137 383 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 AC068724.3-201ENST00000625906 87 ntBASIC3.6□□□□□ -1.83
PHGDHO43175 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PHGDHO43175 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHGDHO43175 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PHGDHO43175 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHGDHO43175 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PHGDHO43175 AL136164.4-201ENST00000625013 2135 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.59□□□□□ -1.83
PHGDHO43175 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PHGDHO43175 RNU6-166P-201ENST00000384371 107 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RNU6-658P-201ENST00000384606 106 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RN7SKP32-201ENST00000410167 303 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 CYCSP33-201ENST00000414485 327 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.59□□□□□ -1.83
PHGDHO43175 PDCL2P1-201ENST00000419302 352 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RPL17P36-201ENST00000420302 549 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AL353729.1-201ENST00000425044 720 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.59□□□□□ -1.83
PHGDHO43175 RPL23AP82-202ENST00000427528 469 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC092017.2-201ENST00000427600 362 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AL365400.1-201ENST00000431854 640 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RPS29P7-201ENST00000439662 171 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RPL37P4-201ENST00000448908 268 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.59□□□□□ -1.83
PHGDHO43175 AC092798.1-201ENST00000458542 409 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 snoU13.28-201ENST00000459235 104 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RNU6-329P-201ENST00000459618 107 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC087884.1-201ENST00000469738 328 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC117503.1-201ENST00000472241 394 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RN7SL132P-201ENST00000478131 296 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC026784.1-201ENST00000507986 352 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RN7SKP21-201ENST00000516503 220 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC007991.1-201ENST00000522680 631 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AP000867.2-201ENST00000532468 320 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 OR8R1P-201ENST00000543943 764 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC005668.1-201ENST00000571142 476 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 MIR4286-201ENST00000580651 93 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 MIR4742-201ENST00000581069 85 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC006077.1-201ENST00000604746 343 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC021646.1-201ENST00000605469 484 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RNU1-30P-201ENST00000606575 163 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC103710.3-201ENST00000608157 948 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PHGDHO43175 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.59□□□□□ -1.83
PHGDHO43175 AC104985.2-201ENST00000620598 500 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.59□□□□□ -1.83
PHGDHO43175 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.59□□□□□ -1.83
PHGDHO43175 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PHGDHO43175 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.83
PHGDHO43175 AC066616.2-201ENST00000559334 1481 ntBASIC3.59□□□□□ -1.84
PHGDHO43175 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
PHGDHO43175 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.59□□□□□ -1.84
PHGDHO43175 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PHGDHO43175 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PHGDHO43175 SNORD14B-201ENST00000364533 90 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 SNORD81.2-201ENST00000365153 76 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AL356057.2-201ENST00000403318 432 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AL445189.1-201ENST00000405722 338 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 RNU2-3P-201ENST00000410144 191 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AL592148.1-201ENST00000413568 445 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 RPL26P27-201ENST00000414397 437 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AL159169.1-201ENST00000421119 127 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.58□□□□□ -1.84
PHGDHO43175 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.58□□□□□ -1.84
PHGDHO43175 MTND4LP16-201ENST00000440828 295 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.58□□□□□ -1.84
PHGDHO43175 AC093019.1-201ENST00000443135 252 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 NDUFB1P2-201ENST00000449477 176 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 PPP1R2P5-201ENST00000457256 603 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 RPL23AP62-201ENST00000463396 453 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 TRBVA-201ENST00000498804 316 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.58□□□□□ -1.84
PHGDHO43175 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.58□□□□□ -1.84
PHGDHO43175 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.58□□□□□ -1.84
PHGDHO43175 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.58□□□□□ -1.84
PHGDHO43175 RNU6-1069P-201ENST00000516612 133 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AC069113.1-201ENST00000517763 267 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 RNU6-323P-201ENST00000521915 107 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.58□□□□□ -1.84
PHGDHO43175 RAB11AP2-201ENST00000545905 639 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 SCOCP1-201ENST00000554676 349 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms