Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.38□□□□□ -2.03
MSH4O15457 RNY3P13-201ENST00000365542 102 ntBASIC2.38□□□□□ -2.03
MSH4O15457 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MSH4O15457 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
MSH4O15457 SET-203ENST00000372688 801 ntTSL 2 BASIC2.38□□□□□ -2.03
MSH4O15457 RNU6-701P-201ENST00000384059 107 ntBASIC2.38□□□□□ -2.03
MSH4O15457 NDUFS5P4-201ENST00000412983 318 ntBASIC2.38□□□□□ -2.03
MSH4O15457 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.38□□□□□ -2.03
MSH4O15457 ZNF90P2-204ENST00000419323 1075 ntBASIC2.38□□□□□ -2.03
MSH4O15457 BPY2DP-201ENST00000422208 265 ntBASIC2.38□□□□□ -2.03
MSH4O15457 SKA2P1-201ENST00000425592 390 ntBASIC2.38□□□□□ -2.03
MSH4O15457 RPL36AP53-201ENST00000432891 316 ntBASIC2.38□□□□□ -2.03
MSH4O15457 MTCYBP39-201ENST00000437562 491 ntBASIC2.38□□□□□ -2.03
MSH4O15457 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.38□□□□□ -2.03
MSH4O15457 AC010095.1-201ENST00000443543 144 ntBASIC2.38□□□□□ -2.03
MSH4O15457 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.38□□□□□ -2.03
MSH4O15457 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.38□□□□□ -2.03
MSH4O15457 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.38□□□□□ -2.03
MSH4O15457 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.38□□□□□ -2.03
MSH4O15457 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.38□□□□□ -2.03
MSH4O15457 AP000852.1-201ENST00000472460 573 ntBASIC2.38□□□□□ -2.03
MSH4O15457 SNORA31.3-201ENST00000516029 96 ntBASIC2.38□□□□□ -2.03
MSH4O15457 RN7SKP40-201ENST00000517211 242 ntBASIC2.38□□□□□ -2.03
MSH4O15457 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.38□□□□□ -2.03
MSH4O15457 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.38□□□□□ -2.03
MSH4O15457 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.38□□□□□ -2.03
MSH4O15457 AP006587.4-201ENST00000526053 529 ntBASIC2.38□□□□□ -2.03
MSH4O15457 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MSH4O15457 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.38□□□□□ -2.03
MSH4O15457 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.38□□□□□ -2.03
MSH4O15457 AC002400.1-201ENST00000569310 726 ntBASIC2.38□□□□□ -2.03
MSH4O15457 AC090616.3-201ENST00000582184 217 ntBASIC2.38□□□□□ -2.03
MSH4O15457 AC008751.2-201ENST00000597885 980 ntBASIC2.38□□□□□ -2.03
MSH4O15457 AP001981.2-201ENST00000603241 418 ntBASIC2.38□□□□□ -2.03
MSH4O15457 AC104237.2-201ENST00000612456 443 ntBASIC2.38□□□□□ -2.03
MSH4O15457 AC068057.2-201ENST00000624047 895 ntBASIC2.38□□□□□ -2.03
MSH4O15457 FO624990.1-201ENST00000636373 85 ntBASIC2.38□□□□□ -2.03
MSH4O15457 MIR219B-201ENST00000637023 88 ntBASIC2.38□□□□□ -2.03
MSH4O15457 U2.21-201ENST00000637295 81 ntBASIC2.38□□□□□ -2.03
MSH4O15457 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.37□□□□□ -2.03
MSH4O15457 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
MSH4O15457 ZNF720P1-201ENST00000562403 1939 ntBASIC2.37□□□□□ -2.03
MSH4O15457 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
MSH4O15457 RNU6-778P-201ENST00000363269 103 ntBASIC2.37□□□□□ -2.03
MSH4O15457 SNORA68.1-201ENST00000364537 132 ntBASIC2.37□□□□□ -2.03
MSH4O15457 AL021407.1-201ENST00000404531 386 ntBASIC2.37□□□□□ -2.03
MSH4O15457 AL513475.1-201ENST00000406602 315 ntBASIC2.37□□□□□ -2.03
MSH4O15457 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH4O15457 AC010099.3-201ENST00000423896 409 ntBASIC2.37□□□□□ -2.03
MSH4O15457 MED14P1-201ENST00000430517 648 ntBASIC2.37□□□□□ -2.03
MSH4O15457 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH4O15457 RPL22P17-201ENST00000438729 315 ntBASIC2.37□□□□□ -2.03
MSH4O15457 RPS15AP7-201ENST00000439294 405 ntBASIC2.37□□□□□ -2.03
MSH4O15457 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.37□□□□□ -2.03
MSH4O15457 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH4O15457 FABP5P15-201ENST00000453566 214 ntBASIC2.37□□□□□ -2.03
MSH4O15457 RPS15AP34-201ENST00000487776 387 ntBASIC2.37□□□□□ -2.03
MSH4O15457 AC008716.1-201ENST00000511084 513 ntBASIC2.37□□□□□ -2.03
MSH4O15457 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH4O15457 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH4O15457 RNU6-201P-201ENST00000517100 61 ntBASIC2.37□□□□□ -2.03
MSH4O15457 MTND4LP18-201ENST00000526864 291 ntBASIC2.37□□□□□ -2.03
MSH4O15457 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
MSH4O15457 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH4O15457 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
MSH4O15457 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
MSH4O15457 AC104984.5-201ENST00000586878 94 ntBASIC2.37□□□□□ -2.03
MSH4O15457 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
MSH4O15457 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.37□□□□□ -2.03
MSH4O15457 AC140725.3-201ENST00000616193 880 ntBASIC2.37□□□□□ -2.03
MSH4O15457 MIR7515-201ENST00000637837 67 ntBASIC2.37□□□□□ -2.03
MSH4O15457 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
MSH4O15457 AC110491.1-201ENST00000562191 2010 ntBASIC2.37□□□□□ -2.03
MSH4O15457 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
MSH4O15457 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MSH4O15457 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH4O15457 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
MSH4O15457 RNU6-750P-201ENST00000390946 107 ntBASIC2.36□□□□□ -2.03
MSH4O15457 RNU2-62P-201ENST00000410868 191 ntBASIC2.36□□□□□ -2.03
MSH4O15457 AL139156.1-201ENST00000412785 841 ntBASIC2.36□□□□□ -2.03
MSH4O15457 RPL26P27-201ENST00000414397 437 ntBASIC2.36□□□□□ -2.03
MSH4O15457 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.36□□□□□ -2.03
MSH4O15457 AC011233.1-201ENST00000422812 283 ntBASIC2.36□□□□□ -2.03
MSH4O15457 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH4O15457 AL353777.1-201ENST00000425552 326 ntBASIC2.36□□□□□ -2.03
MSH4O15457 AL593851.1-201ENST00000426171 157 ntBASIC2.36□□□□□ -2.03
MSH4O15457 ISCA1P1-201ENST00000426679 387 ntBASIC2.36□□□□□ -2.03
MSH4O15457 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.36□□□□□ -2.03
MSH4O15457 HMGB1P9-201ENST00000429856 646 ntBASIC2.36□□□□□ -2.03
MSH4O15457 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH4O15457 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH4O15457 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH4O15457 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH4O15457 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.36□□□□□ -2.03
MSH4O15457 RBM43P1-201ENST00000476891 1081 ntBASIC2.36□□□□□ -2.03
MSH4O15457 AC068587.2-201ENST00000478386 781 ntBASIC2.36□□□□□ -2.03
MSH4O15457 GZMAP1-201ENST00000503054 631 ntBASIC2.36□□□□□ -2.03
MSH4O15457 SCARNA17.1-201ENST00000516211 143 ntBASIC2.36□□□□□ -2.03
MSH4O15457 SCARNA17.2-201ENST00000516334 143 ntBASIC2.36□□□□□ -2.03
MSH4O15457 EEF1A1P37-201ENST00000522748 715 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms