Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL356585.4-201ENST00000623078 1229 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC005832.2-201ENST00000538921 1430 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 SNORD114-22-201ENST00000365423 72 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AL606490.4-201ENST00000423117 127 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 RPS29P1-201ENST00000465274 159 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 MRPS17P3-201ENST00000465453 385 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 SNORA4.4-201ENST00000515921 135 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AC019176.1-201ENST00000518519 225 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AC090115.3-201ENST00000553218 849 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 SULT1C2P1-202ENST00000562418 459 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AL356432.3-201ENST00000568952 465 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 MIR3921-201ENST00000577308 85 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 MIR4714-201ENST00000580728 77 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 MTATP6P3-201ENST00000581686 676 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 FAM60CP-201ENST00000591086 664 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 MTCYBP22-201ENST00000603788 447 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AC024581.2-201ENST00000619986 252 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CPSF4LA6NMK7 AL049641.1-201ENST00000441055 1948 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 TAF9BP2-201ENST00000400856 499 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 MIR1283-2-201ENST00000408621 87 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 MIR1276-201ENST00000408707 83 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 TPMTP3-201ENST00000411928 735 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC006461.1-201ENST00000412637 326 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC012497.1-201ENST00000429392 575 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC097499.1-201ENST00000444277 208 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 ARPC3P5-201ENST00000448802 534 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 UBL5P1-201ENST00000507979 193 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AL359273.1-201ENST00000510918 627 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 RNU6-902P-201ENST00000517212 91 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AL049870.4-201ENST00000555741 486 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 DUXAP1-201ENST00000556632 463 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 MIR4653-201ENST00000585107 83 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 MIR4781-201ENST00000585250 76 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC005786.1-201ENST00000588553 154 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC087045.1-201ENST00000605856 382 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AC084824.5-201ENST00000612009 413 ntBASIC0.47□□□□□ -2.33
CPSF4LA6NMK7 AL391516.1-201ENST00000554380 2449 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 DEFB108F-201ENST00000344638 222 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 RNU6-707P-201ENST00000364647 95 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 MIR1303-201ENST00000408625 86 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC007742.1-201ENST00000425789 329 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 MTND4LP10-201ENST00000435146 291 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 ELOCP26-201ENST00000436067 329 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 ATP5EP1-201ENST00000510257 156 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 RNA5SP112-201ENST00000515937 99 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 DEFB108D-201ENST00000527787 222 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC023158.1-201ENST00000561632 1025 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 CYP4A27P-201ENST00000567218 190 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC105224.1-201ENST00000587055 421 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AP000403.1-201ENST00000603349 851 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC055876.5-201ENST00000605667 259 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AL121652.1-201ENST00000608851 448 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 AC008498.1-201ENST00000613012 531 ntBASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CPSF4LA6NMK7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms