Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 HSPA8P1-201ENST00000425843 1833 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 Y_RNA.146-201ENST00000363549 102 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 RNU6-213P-201ENST00000384051 104 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 RNA5SP219-201ENST00000390940 113 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 RPL5P18-201ENST00000406671 891 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 RNU6-954P-201ENST00000411355 107 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 MTATP6P4-201ENST00000427725 675 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 HMGB1P27-201ENST00000431429 603 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 HMGB3P11-201ENST00000440127 604 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 DYNLL1P5-201ENST00000467158 270 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 HMGN1P10-201ENST00000474557 553 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AL049830.2-201ENST00000480072 201 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AC090096.1-201ENST00000489168 390 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 SNORA14.1-201ENST00000516113 141 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 RNU6-327P-201ENST00000516270 127 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 RNU6-1069P-201ENST00000516612 133 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 RNU6-840P-201ENST00000517275 65 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 MIR3171-201ENST00000584270 74 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AC080078.3-201ENST00000605407 463 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AL138726.1-201ENST00000614873 333 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AC084781.2-201ENST00000615568 161 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 AC244205.2-202ENST00000635781 342 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 PRO1804-201ENST00000623780 2050 ntBASIC3.8□□□□□ -1.8
CCDC78A2IDD5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC78A2IDD5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 RNU6-738P-201ENST00000384531 106 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 RNU6-14P-201ENST00000384630 106 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 SNORA16.2-201ENST00000390991 127 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 RNA5SP111-201ENST00000411386 101 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AC027575.1-201ENST00000481064 460 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 UBE2CP3-201ENST00000502715 450 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AC005741.1-201ENST00000511094 432 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 RN7SKP24-201ENST00000515888 284 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 RNU2-69P-201ENST00000516061 100 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 Y_RNA.689-201ENST00000516589 107 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 MIR4444-1-201ENST00000581696 74 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 MIR4444-2-201ENST00000584390 74 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 SNORA62.6-201ENST00000606322 83 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AC022418.1-201ENST00000624118 445 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 U6.98-201ENST00000637157 84 ntBASIC3.79□□□□□ -1.8
CCDC78A2IDD5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CCDC78A2IDD5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC78A2IDD5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC78A2IDD5 MIR423-201ENST00000362201 94 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 Y_RNA.197-201ENST00000364004 102 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 Y_RNA.480-201ENST00000384364 102 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC78A2IDD5 MIR450B-201ENST00000401182 78 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 AL590704.1-201ENST00000402856 794 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 AL391417.1-201ENST00000404100 426 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 MTND2P23-201ENST00000422990 651 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 AL451062.2-201ENST00000427515 271 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 AL445584.1-201ENST00000431451 330 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 GOT2P5-201ENST00000433995 546 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 RPL32P28-201ENST00000443577 397 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 ELOCP24-201ENST00000456370 334 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 AL136097.1-201ENST00000456945 913 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 RPL7P43-201ENST00000478876 753 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 RPS27P27-201ENST00000498779 255 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC78A2IDD5 COPS8P3-201ENST00000526024 482 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 ELOCP31-201ENST00000540463 467 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 HSPE1P5-201ENST00000561489 272 ntBASIC3.78□□□□□ -1.8
CCDC78A2IDD5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms