Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AC005951.2-201ENST00000576282 495 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AF131215.7-201ENST00000602443 707 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AC091152.3-201ENST00000604227 325 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 DUSP12P1-201ENST00000612874 516 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 AL359314.1-201ENST00000616913 261 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 MIR5739-201ENST00000619803 80 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 TEX21P-201ENST00000447107 1476 ntBASIC0.86□□□□□ -2.27
TCRBV3S1A0A5B6 RNU6-778P-201ENST00000363269 103 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 SNORA25.8-201ENST00000364831 128 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 SNORD116-23-201ENST00000384645 92 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 MIR525-201ENST00000384978 85 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 SNORA17.3-201ENST00000391159 129 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AL592310.1-201ENST00000414330 671 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AL449283.1-202ENST00000418249 604 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 SNRPEP10-201ENST00000420249 274 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 FAM204CP-201ENST00000424489 642 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 USP9YP24-201ENST00000434374 697 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AL354941.1-201ENST00000438600 464 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 HMGN2P18-201ENST00000450680 270 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 BX322784.1-201ENST00000455793 1077 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 ICE2P2-201ENST00000483823 2787 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AC093677.1-201ENST00000514414 678 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AP003497.1-201ENST00000528472 562 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 NDUFA5P6-201ENST00000542110 379 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 MIR4422-201ENST00000581938 83 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AP001429.1-201ENST00000602568 530 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 MTCYBP22-201ENST00000603788 447 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 DUXAP11-201ENST00000603858 526 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AC096586.1-201ENST00000610267 561 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AP003485.1-201ENST00000625093 753 ntBASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.85□□□□□ -2.27
TCRBV3S1A0A5B6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 RNU4-62P-201ENST00000410125 130 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 PIGPP2-201ENST00000411569 458 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 USP9YP19-201ENST00000412165 485 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 RPS12P24-201ENST00000412619 387 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 NDUFS5P4-201ENST00000412983 318 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 USP9YP13-201ENST00000417797 480 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 UBE2V1P4-201ENST00000425374 344 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC008850.1-201ENST00000427546 362 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 MTCO1P57-201ENST00000432182 261 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AL691517.1-201ENST00000440833 1235 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AL161788.1-201ENST00000441805 169 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 DYNLT3P2-201ENST00000442517 295 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AL050341.1-201ENST00000447743 313 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 USP9YP34-201ENST00000453983 808 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AP001324.2-201ENST00000461163 319 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC021382.1-201ENST00000483523 359 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC117532.1-201ENST00000514638 323 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 NRON-201ENST00000517270 370 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AP000873.5-201ENST00000533906 236 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC095057.3-201ENST00000567102 1157 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC022387.2-201ENST00000604050 448 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC010900.2-201ENST00000604508 210 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 AC107075.1-201ENST00000613695 314 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 MIR3199-2-201ENST00000636243 86 ntBASIC0.84□□□□□ -2.27
TCRBV3S1A0A5B6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.84□□□□□ -2.28
TCRBV3S1A0A5B6 ZNF849P-201ENST00000594711 1566 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 SGO1P1-201ENST00000603525 1447 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 RNU1-17P-201ENST00000363022 152 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 MIR16-1-201ENST00000385271 89 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 RNU1-78P-201ENST00000391248 165 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 RPL37P10-201ENST00000412884 288 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 AC009474.2-201ENST00000451383 136 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 CYP2C59P-201ENST00000457790 269 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 AC021739.1-201ENST00000559631 174 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 AC079148.1-201ENST00000565944 819 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 AC026271.5-201ENST00000577873 130 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 AL603758.1-201ENST00000618654 241 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 AC099842.1-201ENST00000619919 596 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms