Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC018868.1-201ENST00000491307 315 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 FAM206BP-201ENST00000510179 541 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 MTND5P13-201ENST00000513046 1079 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 RNU6-703P-201ENST00000516946 107 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC079598.5-201ENST00000547460 117 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC009237.15-201ENST00000610252 501 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC009318.2-201ENST00000610917 651 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 TUG1_2.1-201ENST00000614234 87 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC108479.2-201ENST00000617314 601 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AL356292.1-201ENST00000283110 373 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC127391.1-201ENST00000411737 98 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 DPRXP1-201ENST00000426312 460 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 USP9YP24-201ENST00000434374 697 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 UBL5P3-201ENST00000475112 231 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC008628.1-201ENST00000508663 265 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 PSMA3P-201ENST00000555485 635 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AF038458.1-201ENST00000588406 262 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 MIR502-201ENST00000606349 86 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC005332.6-201ENST00000613178 446 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC243773.3-201ENST00000613270 256 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AL357080.1-201ENST00000617394 239 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC253576.2-201ENST00000618815 580 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC099842.1-201ENST00000619919 596 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 AC017037.3-201ENST00000625016 472 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV4A0A0B4J268 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 RNU6-1167P-201ENST00000363227 94 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 RNU6-97P-201ENST00000363387 104 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 RNA5SP126-201ENST00000365092 109 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 MCTS2P-201ENST00000394552 546 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 RN7SKP51-201ENST00000410781 304 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC027644.1-201ENST00000419595 298 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 SEPT7P5-201ENST00000434048 306 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 RPS15AP9-201ENST00000439856 381 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 SEPT14P24-201ENST00000447236 180 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC112771.1-201ENST00000463581 102 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 RPL23AP63-201ENST00000498752 471 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC021146.2-201ENST00000504736 556 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 RPL23AP94-201ENST00000512518 302 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC110760.3-202ENST00000515177 371 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 RNU1-41P-201ENST00000516161 162 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 RNU1-48P-201ENST00000516400 162 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 snoZ278.1-201ENST00000517059 112 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AL356432.3-201ENST00000568952 465 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC016925.2-201ENST00000605108 242 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AL157770.1-201ENST00000623049 439 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC120349.2-201ENST00000625002 298 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 HPVC1-201ENST00000629899 1198 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 AP000648.3-201ENST00000623539 4507 ntBASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
TRAV4A0A0B4J268 ZNF876P-202ENST00000398732 1485 ntBASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 AC002543.1-201ENST00000299783 1954 ntBASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 MIR29C-201ENST00000385231 88 ntBASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 U8.13-201ENST00000390842 128 ntBASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 RNA5SP465-201ENST00000391195 109 ntBASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 AC068050.1-201ENST00000394891 380 ntBASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 AL591034.2-201ENST00000402839 359 ntBASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 TPMTP2-201ENST00000414372 726 ntBASIC1.18□□□□□ -2.22
TRAV4A0A0B4J268 BX119904.4-201ENST00000424402 301 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms