Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC110760.3-202ENST00000515177 371 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 SNORA31.25-201ENST00000517242 134 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 EEF1A1P37-201ENST00000522748 715 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 DEFB131D-201ENST00000526803 184 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC005832.3-201ENST00000537929 631 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC006199.1-201ENST00000548728 219 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC007375.1-201ENST00000554513 578 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 MIR4287-201ENST00000579398 78 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AL158827.2-201ENST00000602494 330 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AL121652.1-201ENST00000608851 448 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC124016.2-201ENST00000610058 665 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 MIR7843-201ENST00000622274 79 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC079416.3-201ENST00000624479 549 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AL691447.3-201ENST00000635020 330 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AL359854.1-201ENST00000614203 1594 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AC092447.10-201ENST00000620607 1652 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 RNU6-486P-201ENST00000363116 107 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 RNU6-1167P-201ENST00000363227 94 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 MIR147B-201ENST00000390185 80 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 GSTA9P-201ENST00000406231 611 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 RNU2-72P-201ENST00000411175 163 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 RPL31P63-201ENST00000422565 375 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 TOMM20P4-201ENST00000427861 435 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 NANOGP2-201ENST00000435391 727 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 HMGN2P10-201ENST00000448085 265 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 PMCHL2-203ENST00000457791 237 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 RPL9P6-201ENST00000492764 598 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AF213884.2-201ENST00000510417 903 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 MRPS17P9-201ENST00000511924 393 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 RNU2-19P-201ENST00000517288 84 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 HSPE1P18-201ENST00000517602 280 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 MIR3618-201ENST00000580330 88 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AC078899.2-201ENST00000595282 212 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AC091152.3-201ENST00000604227 325 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 uc_338.14-201ENST00000613162 166 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AC104763.3-201ENST00000613765 618 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AL136981.2-201ENST00000617319 734 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 AC104454.1-201ENST00000421341 1401 ntBASIC1.8□□□□□ -2.12
USH1CQ9Y6N9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 RNU6-289P-201ENST00000364093 107 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 RPS20P15-201ENST00000412792 311 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 PGBD4P6-201ENST00000421501 610 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AL353729.1-201ENST00000425044 720 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC016691.1-201ENST00000441321 413 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 MTATP6P30-201ENST00000443540 664 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC020550.1-201ENST00000447385 163 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 BZW1P2-201ENST00000473537 826 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC008526.1-201ENST00000509149 338 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC024589.1-201ENST00000512207 263 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 RNA5SP112-201ENST00000515937 99 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC021451.1-201ENST00000523498 1129 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 RANP3-201ENST00000530970 276 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AL121821.2-201ENST00000556081 394 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 DPPA3P3-201ENST00000603842 430 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC068276.1-201ENST00000605793 379 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC084824.5-201ENST00000612009 413 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AL158163.2-201ENST00000619110 700 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC012150.2-201ENST00000621300 544 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC110994.2-201ENST00000635481 492 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 AC011477.1-204ENST00000623416 1325 ntBASIC1.79□□□□□ -2.12
USH1CQ9Y6N9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms