Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A3BPQ9Y5P4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC103988.1-201ENST00000566382 2177 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 RNU6-799P-201ENST00000363567 107 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 RNU6-82P-201ENST00000363970 107 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 RNA5SP139-201ENST00000364340 117 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 Y_RNA.231-201ENST00000364358 102 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 Y_RNA.480-201ENST00000384364 102 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 RNU6-166P-201ENST00000384371 107 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 MIR34A-201ENST00000385130 110 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 OR9R1P-201ENST00000412200 877 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 BPY2DP-201ENST00000422208 265 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AL139415.2-201ENST00000431968 163 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 PRPS1P1-201ENST00000445305 876 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 MTND3P16-201ENST00000452205 344 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 RNU7-170P-201ENST00000459303 61 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 RPL21P99-201ENST00000480369 423 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC009901.1-201ENST00000506703 541 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 RNU2-69P-201ENST00000516061 100 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC022634.1-201ENST00000520765 532 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC092325.1-201ENST00000566449 554 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC012119.1-201ENST00000603184 222 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 NUTF2P8-201ENST00000604593 363 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AC002553.4-201ENST00000616896 331 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 MFSD8-236ENST00000641509 4050 ntBASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.07□□□□□ -1.76
COL4A3BPQ9Y5P4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 MAPK10-322ENST00000641485 4530 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 SNORA75B-201ENST00000384053 137 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 RNU6-38P-201ENST00000384085 107 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 MIR514A2-201ENST00000385131 88 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 MIR514A3-201ENST00000385132 88 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC245291.1-201ENST00000419501 328 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 HMGN2P31-201ENST00000432430 273 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 RNU6-333P-201ENST00000459117 107 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 MTCO3P38-201ENST00000468910 766 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC104472.2-201ENST00000469035 601 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC106707.2-201ENST00000484182 374 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 RPS29P20-201ENST00000489592 171 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 MIR892C-201ENST00000516410 77 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 MTCO3P23-201ENST00000561363 289 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC073539.2-201ENST00000597113 165 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AP000907.4-201ENST00000604143 237 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 RBM11P1-201ENST00000604951 799 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 RMST_4.1-201ENST00000616886 107 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AP003400.5-201ENST00000624827 617 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 AC008669.1-201ENST00000565823 2178 ntBASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A3BPQ9Y5P4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 CEP170P1-201ENST00000502249 4587 ntBASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 RNA5SP119-201ENST00000362715 117 ntBASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 SNORA16.2-201ENST00000390991 127 ntBASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 AL391417.1-201ENST00000404100 426 ntBASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 MRPS10P2-201ENST00000431226 381 ntBASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 AL121601.2-201ENST00000438019 707 ntBASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.05□□□□□ -1.76
COL4A3BPQ9Y5P4 MRPS31P2-201ENST00000451581 518 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms