Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC012181.1-201ENST00000479895 423 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RN7SL293P-201ENST00000481765 281 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RN7SL432P-201ENST00000484057 298 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RPL39P5-202ENST00000512505 151 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AP000889.2-201ENST00000532684 490 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 MIR4474-201ENST00000579189 78 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 MIR3922-201ENST00000585192 84 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AC006254.3-201ENST00000603353 884 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RNU1-30P-201ENST00000606575 163 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AL627309.6-201ENST00000606857 840 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AL359757.2-201ENST00000624309 274 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC121333.1-201ENST00000567488 2709 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 TPTE2P4-201ENST00000258589 1605 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-1252P-201ENST00000363054 104 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 Y_RNA.202-201ENST00000364083 110 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 Y_RNA.339-201ENST00000365325 102 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 Y_RNA.422-201ENST00000384054 114 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-738P-201ENST00000384531 106 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RNY4P36-201ENST00000391116 96 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 Z98941.1-201ENST00000407764 100 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 MIR548K-201ENST00000408406 116 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RNA5SP129-201ENST00000410276 118 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RNU4-14P-201ENST00000410858 122 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-387P-201ENST00000411331 105 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RAC1P6-201ENST00000423911 575 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RPS3AP52-201ENST00000435639 297 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RPL21P23-201ENST00000446654 460 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC020550.1-201ENST00000447385 163 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 Y_RNA.639-201ENST00000458981 102 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-1088P-201ENST00000516850 104 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 SNORA31.20-201ENST00000517111 133 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC100870.1-201ENST00000522035 505 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC008011.1-201ENST00000545989 227 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC092747.3-201ENST00000603769 301 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC116312.1-201ENST00000606841 314 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 Z82243.1-201ENST00000609432 473 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC040896.1-201ENST00000613819 479 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 SNHG22-203ENST00000617833 660 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 MFSD8-236ENST00000641509 4050 ntBASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.25□□□□□ -1.73
CTDP1Q9Y5B0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 Y_RNA.167-201ENST00000363735 109 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-82P-201ENST00000363970 107 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 Y_RNA.216-201ENST00000364205 93 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 RPL5P18-201ENST00000406671 891 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AC074085.1-201ENST00000413598 418 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 RPL30P2-201ENST00000414021 291 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 ARF4P2-201ENST00000430209 526 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 RPL21P8-201ENST00000465083 535 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AC090096.1-201ENST00000489168 390 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 TRBV12-2-201ENST00000489763 344 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AC005741.1-201ENST00000511094 432 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 RANP3-201ENST00000530970 276 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 ELOCP31-201ENST00000540463 467 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AC006116.10-201ENST00000591836 581 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL670379.6-201ENST00000603753 252 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL670379.11-201ENST00000604059 253 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AC008162.1-201ENST00000604718 254 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL670379.1-201ENST00000604752 252 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL670379.5-201ENST00000605253 252 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL670379.12-201ENST00000605291 253 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL670379.8-201ENST00000605353 252 ntBASIC4.24□□□□□ -1.73
CTDP1Q9Y5B0 AL080274.1-201ENST00000605565 220 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms