Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU6-1283P-201ENST00000365314 105 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 Y_RNA.367-201ENST00000365544 101 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 RNU4-48P-201ENST00000365559 182 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 SNORA54-201ENST00000384281 123 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 OR51A5P-201ENST00000415429 942 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AC008850.1-201ENST00000427546 362 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AC092573.2-201ENST00000434546 243 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AL356010.1-201ENST00000456364 102 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 PCBP2P3-201ENST00000509726 843 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 SNORD27.1-201ENST00000516319 72 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 RN7SKP60-201ENST00000516985 239 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 CASP1P1-201ENST00000526345 212 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 OR5BN1P-201ENST00000532955 829 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 HMGB1P14-201ENST00000557424 591 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 MIR4672-201ENST00000583126 81 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AP000907.4-201ENST00000604143 237 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AC010133.1-201ENST00000615809 842 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AC090132.2-201ENST00000615881 347 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 MTND5P17-201ENST00000418405 1603 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 AL365361.1-201ENST00000566942 3481 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 RNU6-1090P-201ENST00000364065 94 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 SNORA71.1-201ENST00000364523 117 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 RNU6-877P-201ENST00000383868 107 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 MIR454-201ENST00000390180 115 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 UBE2V1P2-201ENST00000397758 440 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 FDX1P2-201ENST00000450769 375 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC104472.2-201ENST00000469035 601 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC006483.1-201ENST00000487308 313 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 FAM92A1P2-202ENST00000504766 877 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 MTND1P35-201ENST00000526739 508 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AP001646.1-201ENST00000527936 915 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 NRBF2P5-201ENST00000603087 788 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC006023.1-201ENST00000603944 259 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AL121992.2-201ENST00000606262 256 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC002553.4-201ENST00000616896 331 ntBASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK11AQ9UQ88 AC000403.1-201ENST00000613696 3585 ntBASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 SNORD15B-201ENST00000384714 146 ntBASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 AC134698.4-201ENST00000523451 826 ntBASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 RPL12P50-201ENST00000603116 116 ntBASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 AC130324.3-201ENST00000614165 542 ntBASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 OR4G2P-202ENST00000641004 1759 ntBASIC4.91□□□□□ -1.62
CDK11AQ9UQ88 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK11AQ9UQ88 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CDK11AQ9UQ88 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.9□□□□□ -1.62
CDK11AQ9UQ88 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.9□□□□□ -1.62
CDK11AQ9UQ88 Y_RNA.89-201ENST00000363031 102 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 RNU6-179P-201ENST00000363350 107 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 Y_RNA.295-201ENST00000364918 102 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 RNA5SP252-201ENST00000391131 119 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 ZNF90P2-204ENST00000419323 1075 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 AL606489.2-201ENST00000433886 234 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 SEPT14P3-201ENST00000439401 183 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 RPS15AP9-201ENST00000439856 381 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 AL732372.2-207ENST00000445840 183 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 WASF1P1-201ENST00000447560 1131 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 MRPS31P2-201ENST00000451581 518 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 SEPT14P2-201ENST00000453405 183 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 RNU6-420P-201ENST00000458780 107 ntBASIC4.9□□□□□ -1.63
CDK11AQ9UQ88 RNU7-182P-201ENST00000459009 62 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms