Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC018868.1-201ENST00000491307 315 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 SMURF2P1-201ENST00000514992 481 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 NDUFA5P6-201ENST00000542110 379 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AC006199.1-201ENST00000548728 219 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AC023825.1-201ENST00000566704 1030 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 MTCYBP22-201ENST00000603788 447 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AP001485.1-201ENST00000604799 199 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AP001033.2-201ENST00000609701 1003 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AC108479.2-201ENST00000617314 601 ntBASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
COMMD3Q9UBI1 ZNF209P-201ENST00000593450 2304 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 SUCLA2P2-201ENST00000417269 1309 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 SNORD14B-201ENST00000364533 90 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 SNORD51.1-201ENST00000365405 77 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1□□□□□ -2.25
COMMD3Q9UBI1 RNU6-1005P-201ENST00000384519 107 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 RNA5SP465-201ENST00000391195 109 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AL590084.1-201ENST00000407885 387 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 MIR1283-2-201ENST00000408621 87 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AL592310.1-201ENST00000414330 671 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 SKA2P1-201ENST00000425592 390 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 SNORD13-201ENST00000459299 104 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC018437.1-201ENST00000492214 406 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC048346.1-201ENST00000510247 144 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 RNU1-92P-201ENST00000517017 135 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 RNA5SP135-201ENST00000517019 125 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 AP000873.5-201ENST00000533906 236 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1□□□□□ -2.25
COMMD3Q9UBI1 RRN3P3-201ENST00000549207 578 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC067805.1-201ENST00000559344 470 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC093519.1-201ENST00000566109 298 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AL356432.3-201ENST00000568952 465 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC023824.3-201ENST00000569003 562 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC103987.3-201ENST00000582071 292 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC099842.1-201ENST00000619919 596 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AL118508.4-201ENST00000624142 1176 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 AC104820.1-201ENST00000624183 307 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 U2.21-201ENST00000637295 81 ntBASIC1□□□□□ -2.25
COMMD3Q9UBI1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1□□□□□ -2.25
COMMD3Q9UBI1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 RNU6-778P-201ENST00000363269 103 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 MIR513A1-201ENST00000385138 129 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AC019178.2-201ENST00000423595 505 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 MTND4P24-201ENST00000424002 397 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 UBE2V1P4-201ENST00000425374 344 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AC079448.1-201ENST00000449377 373 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AL137159.1-201ENST00000452808 512 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AC244505.3-201ENST00000454598 187 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 RNA5SP57-201ENST00000459463 123 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AP001324.2-201ENST00000461163 319 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AC117522.2-201ENST00000510049 657 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 RNA5SP445-201ENST00000515889 115 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 LARP7P2-201ENST00000575306 125 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 SNRPGP17-201ENST00000603780 214 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AL163051.2-201ENST00000618976 735 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AL512506.2-201ENST00000624472 458 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AL159972.1-201ENST00000625150 448 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
COMMD3Q9UBI1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 RNU6-582P-201ENST00000362989 107 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 SNORA62.1-201ENST00000364287 154 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 SNORA67.5-201ENST00000391036 107 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 TMSB4XP8-201ENST00000402089 135 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 TXNP7-201ENST00000406296 293 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 TMSB4XP6-201ENST00000415187 135 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 TMSB4XP1-201ENST00000424567 135 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 USP9YP24-201ENST00000434374 697 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 PTENP1-201ENST00000447117 1215 ntBASIC0.98□□□□□ -2.25
COMMD3Q9UBI1 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms