Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 S100A11P2-201ENST00000467589 312 ntBASIC4.7□□□□□ -1.66
USP35Q9P2H5 AL163973.1-201ENST00000484753 577 ntBASIC4.7□□□□□ -1.66
USP35Q9P2H5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.7□□□□□ -1.66
USP35Q9P2H5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.7□□□□□ -1.66
USP35Q9P2H5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.7□□□□□ -1.66
USP35Q9P2H5 SUMO2P20-201ENST00000520803 283 ntBASIC4.7□□□□□ -1.66
USP35Q9P2H5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.7□□□□□ -1.66
USP35Q9P2H5 AP005435.4-201ENST00000529514 284 ntBASIC4.7□□□□□ -1.66
USP35Q9P2H5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.7□□□□□ -1.66
USP35Q9P2H5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.7□□□□□ -1.66
USP35Q9P2H5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.7□□□□□ -1.66
USP35Q9P2H5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.7□□□□□ -1.66
USP35Q9P2H5 AL670379.4-201ENST00000605279 254 ntBASIC4.7□□□□□ -1.66
USP35Q9P2H5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.7□□□□□ -1.66
USP35Q9P2H5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
USP35Q9P2H5 AC006020.1-201ENST00000420179 1854 ntBASIC4.7□□□□□ -1.66
USP35Q9P2H5 Y_RNA.33-201ENST00000362591 102 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 RNU6-283P-201ENST00000364788 107 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 RNA5SP111-201ENST00000411386 101 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 AC063979.1-201ENST00000415539 377 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 AL031779.1-201ENST00000415663 330 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 ZNF885P-201ENST00000420174 1098 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 RPL7P54-201ENST00000438336 674 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 AC016691.1-201ENST00000441321 413 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 RPL37P4-201ENST00000448908 268 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 AL031183.1-201ENST00000457667 207 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 RN7SL330P-201ENST00000469709 307 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 SNORA31.21-201ENST00000517180 77 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.69□□□□□ -1.66
USP35Q9P2H5 NACAP3-201ENST00000552100 481 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 AL157687.1-201ENST00000554853 619 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 AL512360.1-201ENST00000555346 234 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 DEFB131E-202ENST00000602581 683 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP35Q9P2H5 AC024940.5-201ENST00000622889 474 ntBASIC4.69□□□□□ -1.66
USP35Q9P2H5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP35Q9P2H5 SRP72P2-201ENST00000344851 1979 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 Y_RNA.255-201ENST00000364581 97 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 RNU1-73P-201ENST00000383971 164 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 USP9YP6-201ENST00000413550 854 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.68□□□□□ -1.66
USP35Q9P2H5 RPL26P9-201ENST00000457466 433 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC092436.1-201ENST00000506450 503 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.68□□□□□ -1.66
USP35Q9P2H5 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC136619.2-201ENST00000563361 631 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC025678.1-201ENST00000567861 338 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC010653.1-201ENST00000571108 881 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 MTATP6P3-201ENST00000581686 676 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC004492.1-201ENST00000607036 742 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC126118.1-201ENST00000607744 628 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AL161629.2-201ENST00000615347 275 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 SNORD39.4-201ENST00000620099 78 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC068137.3-201ENST00000639191 341 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC073869.6-201ENST00000640656 341 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP35Q9P2H5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP35Q9P2H5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP35Q9P2H5 AC004944.1-201ENST00000517807 3059 ntBASIC4.68□□□□□ -1.66
USP35Q9P2H5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USP35Q9P2H5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP35Q9P2H5 MTND4P35-201ENST00000604257 1375 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC103988.1-201ENST00000566382 2177 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 Y_RNA.372-201ENST00000365599 102 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
USP35Q9P2H5 Y_RNA.599-201ENST00000410489 109 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.67□□□□□ -1.66
USP35Q9P2H5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC006028.1-201ENST00000438379 402 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC025750.2-201ENST00000442609 450 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC073415.1-201ENST00000449240 153 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC010401.1-201ENST00000463867 348 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 RN7SL429P-201ENST00000479090 223 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 RN7SL489P-201ENST00000486185 223 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 RN7SL327P-201ENST00000488659 223 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 TRBV12-2-201ENST00000489763 344 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC114786.4-201ENST00000508771 728 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC009902.1-201ENST00000519351 183 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.67□□□□□ -1.66
USP35Q9P2H5 MIR548AC-201ENST00000585049 88 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 AP003465.2-201ENST00000602571 373 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC007938.3-201ENST00000604965 623 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms