Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 PCMTD1P7-201ENST00000634506 357 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 MIR219B-201ENST00000637023 88 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 DDX43P2-201ENST00000604753 1354 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 Z75746.1-201ENST00000440243 2080 ntBASIC1.81□□□□□ -2.12
VAPAQ9P0L0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.81□□□□□ -2.12
VAPAQ9P0L0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.8□□□□□ -2.12
VAPAQ9P0L0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VAPAQ9P0L0 NACAP2-201ENST00000318548 624 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 Y_RNA.311-201ENST00000365068 96 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 RNU2-20P-201ENST00000410425 191 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPAQ9P0L0 EIF1AXP1-201ENST00000419267 435 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPAQ9P0L0 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC104651.1-201ENST00000427559 735 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.8□□□□□ -2.12
VAPAQ9P0L0 RPL7P12-201ENST00000446719 750 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC092001.1-201ENST00000453012 261 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 RPL21P134-201ENST00000453468 483 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.8□□□□□ -2.12
VAPAQ9P0L0 RPL36AP48-201ENST00000485521 314 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC107032.1-201ENST00000485945 480 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 RPL9P6-201ENST00000492764 598 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC026801.1-201ENST00000497178 464 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC016550.1-201ENST00000505348 785 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.8□□□□□ -2.12
VAPAQ9P0L0 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AL355297.2-201ENST00000604792 129 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC131235.4-201ENST00000609288 620 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
VAPAQ9P0L0 AC244517.12-201ENST00000623581 663 ntBASIC1.8□□□□□ -2.12
VAPAQ9P0L0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 RNU6-560P-201ENST00000364007 108 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 USP9YP33-201ENST00000412220 421 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 EDDM3CP-201ENST00000415977 425 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 RPS24P7-201ENST00000416921 246 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC097463.2-201ENST00000421074 142 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 ISCA1P1-201ENST00000426679 387 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 USP9YP11-201ENST00000427537 717 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 USP9YP35-201ENST00000435696 412 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AP000542.1-201ENST00000448473 371 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC096571.1-202ENST00000506634 735 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 MIR1273D-201ENST00000577266 86 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 MIR4287-201ENST00000579398 78 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AF129408.1-201ENST00000608767 431 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC004908.2-201ENST00000609090 574 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC092574.1-201ENST00000609771 420 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC116618.1-201ENST00000634617 774 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 AC104454.1-201ENST00000421341 1401 ntBASIC1.79□□□□□ -2.12
VAPAQ9P0L0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.79□□□□□ -2.12
VAPAQ9P0L0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 Y_RNA.472-201ENST00000384322 102 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AL359634.1-202ENST00000404721 284 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 MIR320C1-201ENST00000408566 88 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 MTCO1P17-201ENST00000411522 491 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AC096638.1-201ENST00000444678 216 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 PMCHL2-203ENST00000457791 237 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AC034222.1-201ENST00000494052 532 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AP001269.3-201ENST00000588718 329 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 BNIP3P27-201ENST00000599991 412 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AC007038.2-201ENST00000608095 740 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AC022202.1-201ENST00000613515 211 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 MIR5739-201ENST00000619803 80 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AP003400.5-201ENST00000624827 617 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.78□□□□□ -2.12
VAPAQ9P0L0 U6.99-201ENST00000637524 83 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 LINC02211-204ENST00000642024 1070 ntBASIC1.78□□□□□ -2.12
VAPAQ9P0L0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VAPAQ9P0L0 RNA5SP276-201ENST00000362580 94 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms