Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 U7.8-201ENST00000619968 63 ntBASIC3.9□□□□□ -1.79
DDX56Q9NY93 AC110079.1-202ENST00000635213 138 ntBASIC3.9□□□□□ -1.79
DDX56Q9NY93 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DDX56Q9NY93 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
DDX56Q9NY93 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DDX56Q9NY93 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC004944.1-201ENST00000517807 3059 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
DDX56Q9NY93 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 AL592148.1-201ENST00000413568 445 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 RN7SL323P-201ENST00000494712 295 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC069439.1-201ENST00000494739 167 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 Y_RNA.654-201ENST00000497848 106 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 HIGD1AP13-201ENST00000509878 289 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 RNU6-189P-201ENST00000516120 101 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC006199.1-201ENST00000548728 219 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 MIR5583-1-201ENST00000580941 59 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC010525.2-201ENST00000590920 195 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 CR392039.5-201ENST00000623201 510 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 SCARNA4-202ENST00000625402 129 ntBASIC3.89□□□□□ -1.79
DDX56Q9NY93 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DDX56Q9NY93 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.89□□□□□ -1.79
DDX56Q9NY93 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DDX56Q9NY93 AC093536.2-201ENST00000565257 1406 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 MIR372-201ENST00000362225 67 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 RNU6-1280P-201ENST00000365211 107 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX56Q9NY93 MIR514A2-201ENST00000385131 88 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 MIR514A3-201ENST00000385132 88 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 RNU6-750P-201ENST00000390946 107 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AL391417.1-201ENST00000404100 426 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 U3.37-201ENST00000408528 213 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 RNU4-26P-201ENST00000410270 107 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 RNU2-49P-201ENST00000410666 184 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 RNA5SP31-201ENST00000411144 127 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AC023141.4-201ENST00000412031 328 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 BX682237.1-201ENST00000415016 335 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX56Q9NY93 AL358075.3-201ENST00000426289 226 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX56Q9NY93 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX56Q9NY93 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX56Q9NY93 AC125238.1-201ENST00000448842 249 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 RPS29P12-201ENST00000460178 152 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX56Q9NY93 MIR2116-201ENST00000517221 80 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 CYCSP27-201ENST00000527643 293 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DDX56Q9NY93 OR11H5P-201ENST00000554039 926 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AL121821.2-201ENST00000556081 394 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AC007151.1-201ENST00000572774 483 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX56Q9NY93 AC024220.1-201ENST00000603675 484 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AL590392.1-201ENST00000604960 446 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX56Q9NY93 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX56Q9NY93 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX56Q9NY93 AP003122.5-201ENST00000527668 3766 ntBASIC3.88□□□□□ -1.79
DDX56Q9NY93 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX56Q9NY93 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX56Q9NY93 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.87□□□□□ -1.79
DDX56Q9NY93 RNU6-898P-201ENST00000365627 104 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 Z98749.2-208ENST00000381646 500 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 POLHP1-201ENST00000411806 470 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 RAB9AP3-201ENST00000412737 573 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 C4BPAP2-201ENST00000428434 478 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.87□□□□□ -1.79
DDX56Q9NY93 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.87□□□□□ -1.79
DDX56Q9NY93 OR4C10P-201ENST00000434991 931 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 AL161651.1-201ENST00000440882 223 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 RAB9AP1-201ENST00000449393 573 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 AC009220.1-201ENST00000451614 275 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX56Q9NY93 AL441985.1-201ENST00000457727 251 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 RAC1P5-201ENST00000512182 576 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 MTCO1P35-201ENST00000515270 228 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 RNU1-86P-201ENST00000516108 154 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 RNU1-107P-201ENST00000516617 154 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 SCARNA14-201ENST00000516903 136 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.87□□□□□ -1.79
DDX56Q9NY93 MIR3186-201ENST00000577404 85 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX56Q9NY93 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX56Q9NY93 RPL23AP78-201ENST00000599928 470 ntBASIC3.87□□□□□ -1.79
DDX56Q9NY93 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX56Q9NY93 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX56Q9NY93 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 306.7 ms