Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC007619.2-201ENST00000605743 379 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AP002360.4-201ENST00000606980 481 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC096577.2-201ENST00000611455 153 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 RNU6-799P-201ENST00000363567 107 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 Y_RNA.367-201ENST00000365544 101 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 SMIM11P1-201ENST00000369586 178 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 RNU6-74P-201ENST00000384235 107 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 MIR34B-201ENST00000385076 84 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC114491.1-201ENST00000416095 246 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 RAC1P6-201ENST00000423911 575 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 UBE2D3P2-201ENST00000424409 445 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 USP12PX-201ENST00000432383 1057 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC093899.1-201ENST00000457984 376 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC105914.1-201ENST00000511798 226 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 SNORA74D-201ENST00000516404 141 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 RNU6-1256P-201ENST00000516539 103 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 RNU6-1092P-201ENST00000516955 87 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 RNU6-410P-201ENST00000517006 107 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC026403.1-201ENST00000518938 295 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AK6P1-201ENST00000540219 478 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC060766.3-201ENST00000591442 263 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AP001596.2-201ENST00000608410 312 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AP002826.1-201ENST00000608835 315 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 AL359880.1-201ENST00000621879 266 ntBASIC2.73□□□□□ -1.97
NDE1Q9NXR1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NDE1Q9NXR1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 OR4G2P-201ENST00000328113 903 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 DEFB108F-201ENST00000344638 222 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 RNU6-1090P-201ENST00000364065 94 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 RNA5SP72-201ENST00000364442 117 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 RNU6-108P-201ENST00000365558 107 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AL139095.1-201ENST00000404326 391 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 BX682237.1-201ENST00000415016 335 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 MTATP6P18-201ENST00000417994 673 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AL353678.1-201ENST00000422735 741 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC091286.1-201ENST00000431233 461 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 RPS20P5-201ENST00000434808 360 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC006028.1-201ENST00000438379 402 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 BNIP3P2-201ENST00000441221 577 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC020550.1-201ENST00000447385 163 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 PSPHP1-201ENST00000450062 261 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC013267.1-201ENST00000458227 267 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 SNORD97-201ENST00000459187 142 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 RPL27AP5-201ENST00000469428 449 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 RN7SL601P-201ENST00000471221 293 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC079382.1-201ENST00000493346 557 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AIG1P1-201ENST00000503376 148 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC117522.3-201ENST00000507974 584 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC009646.1-201ENST00000510455 318 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 NRON-201ENST00000517270 370 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 MTND4LP26-201ENST00000518144 282 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AP006587.4-201ENST00000526053 529 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AP001893.2-201ENST00000526949 202 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AP001646.1-201ENST00000527936 915 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC091564.4-201ENST00000533934 2194 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC027807.1-201ENST00000559921 996 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC138761.3-201ENST00000579993 334 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC007363.1-201ENST00000604736 620 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC008536.2-201ENST00000607284 349 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms