Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CCM2LQ9NUG4 HMGB1P14-201ENST00000557424 591 ntBASIC3.85□□□□□ -1.79
CCM2LQ9NUG4 MIR4286-201ENST00000580651 93 ntBASIC3.85□□□□□ -1.79
CCM2LQ9NUG4 AL645944.1-201ENST00000603857 493 ntBASIC3.85□□□□□ -1.79
CCM2LQ9NUG4 AC090574.1-201ENST00000623186 233 ntBASIC3.85□□□□□ -1.79
CCM2LQ9NUG4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCM2LQ9NUG4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCM2LQ9NUG4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CCM2LQ9NUG4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCM2LQ9NUG4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AF117829.1-206ENST00000621883 3802 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 Y_RNA.67-201ENST00000362870 100 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 RNU6-525P-201ENST00000363685 104 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 Y_RNA.324-201ENST00000365165 102 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 SNORA1.3-201ENST00000384676 136 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 RPL21P17-201ENST00000397467 475 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 RN7SKP158-201ENST00000410453 326 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 CYCSP19-201ENST00000411715 316 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 RPL37P10-201ENST00000412884 288 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AC007560.1-201ENST00000426912 237 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 RPL23AP52-201ENST00000439311 478 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AL078601.1-201ENST00000444542 271 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AL132838.2-201ENST00000492041 314 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 MTND5P5-201ENST00000503764 376 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 HMGN1P13-201ENST00000505795 138 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 RNU6-572P-201ENST00000516724 80 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 MIR3944-201ENST00000581277 108 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 POLR3GP2-201ENST00000588366 668 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AL356055.1-201ENST00000602528 446 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 NUTF2P8-201ENST00000604593 363 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AC113403.1-201ENST00000604910 193 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 FTX_3.1-201ENST00000610451 147 ntBASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.84□□□□□ -1.79
CCM2LQ9NUG4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.84□□□□□ -1.8
CCM2LQ9NUG4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CCM2LQ9NUG4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCM2LQ9NUG4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.84□□□□□ -1.8
CCM2LQ9NUG4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCM2LQ9NUG4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.84□□□□□ -1.8
CCM2LQ9NUG4 AC006026.1-201ENST00000444025 1803 ntBASIC3.84□□□□□ -1.8
CCM2LQ9NUG4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.84□□□□□ -1.8
CCM2LQ9NUG4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 SNORD46.1-201ENST00000364139 104 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 Y_RNA.431-201ENST00000384086 102 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 RNU6-1297P-201ENST00000384415 104 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 MIR34A-201ENST00000385130 110 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 RPS15AP6-201ENST00000420703 385 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 HMGN2P30-201ENST00000423237 256 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 MTND1P14-201ENST00000427400 950 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 HMGB1P9-201ENST00000429856 646 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 AC139453.3-201ENST00000493276 369 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 AC100830.2-201ENST00000581636 240 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 APOOP1-201ENST00000604695 592 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 AC002076.2-201ENST00000617362 122 ntBASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCM2LQ9NUG4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 AC007656.2-201ENST00000624902 4547 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 Y_RNA.58-201ENST00000362807 102 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 Y_RNA.154-201ENST00000363624 102 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RNY3P1-201ENST00000365085 102 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 RNY3-201ENST00000365484 102 ntBASIC3.82□□□□□ -1.8
CCM2LQ9NUG4 Y_RNA.490-201ENST00000384413 102 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms